Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

4107 Articles

Genome-wide and single-base resolution DNA methylomes of the Sea Lamprey (Petromyzon marinus) Reveal Gradual Transition of the Genomic Methylation Pattern in Early Vertebrates

Zhao Zhang, Gangbiao Liu, Yangyun Zhou, James P. B. Lloyd, David W. McCauley, Weiming Li, Xun Gu, Zhixi Su

10.1101/033233 — Posted: 2015-11-30

An evaluation of transcriptome-based exon capture for frog phylogenomics across multiple scales of divergence (Class: Amphibia, Order: Anura)

Daniel Portik, Lydia Smith, Ke Bi

10.1101/031468 — Posted: 2015-11-12

SpectralTDF: transition densities of diffusion processes with time-varying selection parameters, mutation rates, and effective population sizes

Matthias Steinrücken, Ethan M Jewett, Yun S Song

10.1101/029736 — Posted: 2015-10-27

A Novel Mechanism for Color Vision: Pupil Shape and Chromatic Aberration Can Provide Spectral Discrimination for Color Blind Organisms.

Alexander L Stubbs, Christopher W Stubbs

10.1101/017756 — Posted: 2015-10-26

Gene discovery for Mendelian conditions via social networking: de novo variants in KDM1A cause developmental delay and distinctive facial features

Jessica Chong, Joon-Ho Yu, Peter Lorentzen, Karen Park, Seema M Jamal, Holly K Tabor, Anita Rauch, Margarita Sifuentes Saenz, Eugen Boltshauser, Karynne E Patterson, Deborah A Nickerson, University of Washington Center for Mendelian Geno, Michael J Bamshad

10.1101/028241 — Posted: 2015-10-03

Deep learning for population genetic inference

Sara Sheehan, Yun S. Song

10.1101/028175 — Posted: 2015-10-02

Social selection parapatry in an Afrotropical sunbird

Jay P McEntee, Joshua Penalba, Chacha Werema, Elia Mulungu, Maneno Mbilinyi, David Moyer, Louis Hansen, Jon Fjeldsaa, Rauri C.K. Bowie

10.1101/027417 — Posted: 2015-09-23

Using Ancient Samples in Projection Analysis

Melinda A Yang, Montgomery Slatkin

10.1101/025015 — Posted: 2015-08-20

Oxygen changes drive non-uniform scaling in Drosophila melanogaster embryogenesis

Steven Gregory Kuntz, Michael B. Eisen

10.1101/024208 — Posted: 2015-08-12

Isolation-By-Distance-and-Time in a stepping-stone model

Nicolas Duforet-Frebourg, Montgomery Slatkin

10.1101/024133 — Posted: 2015-08-07

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