Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

3883 Articles

CH···O Interactions Are Not the Cause of Trends in Reactivity and Secondary Kinetic Isotope Effects for Enzymatic SN2 Methyl Transfer Reactions

Jianyu Zhang, Judith P. Klinman

10.1101/071043 — Posted: 2016-09-01

Targeted reconstruction of T cell receptor sequence from single cell RNA-sequencing links CDR3 length to T cell differentiation state

Shaked Afik, Kathleen B Yates, Kevin Bi, Samuel Darko, Jernej Godec, Ulrike Gerdemann, Leo Swadling, Daniel C Douek, Paul Klenerman, Eleanor J Barnes, Arlene H Sharpe, W. Nicholas Haining, Nir Yosef

10.1101/072744 — Posted: 2016-08-31

Do Read Errors Matter for Genome Assembly?

Ilan Shomorony, Thomas Courtade, David Tse

10.1101/014399 — Posted: 2016-08-31

Ordinary Differential Equations in Cancer Biology

Margaret P Chapman, Claire J. Tomlin

10.1101/071134 — Posted: 2016-08-23

Ohana, a tool set for population genetic analyses of admixture components

Jade Yu Cheng, Thomas Mailund, Rasmus Nielsen

10.1101/071233 — Posted: 2016-08-23

Molecular mechanisms of substrate-controlled ring dynamics and sub-stepping in a nucleic-acid dependent hexameric motor

Nathan D. Thomsen, Michael R. Lawson, Lea B. Witkowsky, Song Qu, James M. Berger

10.1101/069559 — Posted: 2016-08-16

Ligand-induced and small molecule control of substrate loading in a hexameric helicase

Michael R. Lawson, Kevin Dyer, James M. Berger

10.1101/069773 — Posted: 2016-08-16

A Systems-Level Model Reveals That 1,2-Propanediol Utilization Microcompartments Enhance Pathway Flux Through Intermediate Sequestration.

Christopher M Jakobson, Marilyn F. Slininger, Danielle Tullman-Ercek, Niall M. Mangan

10.1101/069542 — Posted: 2016-08-14

RNase H enables efficient repair of R-loop induced DNA damage

Jeremy D. Amon, Douglas Koshland

10.1101/068742 — Posted: 2016-08-09

How the AFF1/4 scaffold recruits the elongation factor ELL2 to promote HIV-1 proviral transcription

Shiqian Qi, Zichong Li, Ursula Schulze-Gahmen, Goran Stjepanovic, Qiang Zhou, James Hurley

10.1101/068262 — Posted: 2016-08-06

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