Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

4474 Articles

Longitudinal single-cell epitope and RNA-sequencing reveals the immunological impact of type 1 interferon autoantibodies in critical COVID-19

van der Wijst, M. G. P., Vazquez, S. E., Hartoularos, G. C., Bastard, P., Grant, T., Bueno, R., Lee, D. S., Greenland, J. R., Sun, Y., Perez, R., Ogorodnikov, A., Ward, A., Mann, S. A., Lynch, K. L., Yun, C., Havlir, D. V., Chamie, G., Marquez, C., Greenhouse, B., Lionakis, M. S., Norris, P. J., Dumont, L. J., Kelly, K., Zhang, P., Zhang, Q., Gervais, A., Le Voyer, T., Whatley, A., Si, Y., Byrne, A., Combes, A. J., Arkal, A., Song, Y. S., Fragiadakis, G. K., UCSF COMET consortium, , Kangelaris, K., Calfee, C. S., Erle, D. J., Hendrickson, C., Krummel, M. F., Woodruff, P. G., Langelier, C. R.

10.1101/2021.03.09.434529 — Posted: 2021-03-10

Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression.

Roux de Bezieux, H., Van den Berge, K., Street, K. N., Dudoit, S.

10.1101/2021.03.09.433671 — Posted: 2021-03-10

A Tail Fiber Protein and a Receptor-Binding Protein Mediate ICP2 Bacteriophage Interactions with Vibrio cholerae OmpU

Lim, A. N. W., Yen, M., Seed, K., Lazinski, D. W., Camilli, A.

10.1101/2021.03.08.434494 — Posted: 2021-03-09

Transmission, infectivity, and antibody neutralization of an emerging SARS-CoV-2 variant in California carrying a L452R spike protein mutation

Deng, X., Garcia-Knight, M. A., Khalid, M. M., Servellita, V., Wang, C., Morris, M. K., Sotomayor-Gonzalez, A., Glasner, D. R., Reyes, K. R., Gliwa, A. S., Reddy, N. P., Sanchez San Martin, C., Federman, S., Cheng, J., Balcerek, J., Taylor, J., Streithorst, J. A., Miller, S., Kumar, G. R., Sreekumar, B., Chen, P.-Y., Schulze-Gahmen, U., Taha, T. Y., Hayashi, J. M., Siomoneau, C. R., McMahon, S., Lidsky, P. V., Xiao, Y., Green, N. M., Hemarajata, P., Espinosa, A., Kath, C., Haw, M., Bell, J., Hacker, J. K., Hanson, C., Wadford, D. A., Anaya, C., Ferguson, D., Lareau, L. F., Frankino, P. A., Shi

10.1101/2021.03.07.21252647 — Posted: 2021-03-09

Patterns of gene content and co-occurrence constrain the evolutionary path toward animal association in CPR bacteria

Jaffe, A. L., He, C., Keren, R., Valentin-Alvarado, L. E., Munk, P. L., Bouma-Gregson, K., Farag, I. F., Amano, Y., Sachdeva, R., West, P. T., Banfield, J. F.

10.1101/2021.03.03.433784 — Posted: 2021-03-08

A H3K9me2-Binding Protein AGDP3 Limits DNA Methylation and Transcriptional Gene Silencing in Arabidopsis

Zhou, X., Wei, M., Nie, W., Xi, Y., Du, X., Tang, K., Peng, L., Zheng, Q., Satheesh, V., Luo, J., Wang, Y., Liu, R., Yang, Z., Zhong, Y., An, G.-Y., Zhu, J.-K., Du, J., Lei, M.

10.1101/2021.03.08.434320 — Posted: 2021-03-08

Executive function supports single-shot endowment of value to arbitrary transient goals

McDougle, S. D., Ballard, I. C., Baribault, B., Bishop, S. J., Collins, A. G. E.

10.1101/2020.10.21.348938 — Posted: 2021-03-08

Multiplexed Ion Beam Imaging Readout of Single-Cell Immunoblotting

Lomeli, G., Bosse, M., Bendall, S. C., Angelo, M., Herr, A. E.

10.1101/2021.03.06.434187 — Posted: 2021-03-08

Efficient graphene oxide coating improves cryo-EM sample preparation and data collection from tilted grids

Patel, A. B., Toso, D., Litvak, A., Nogales, E.

10.1101/2021.03.08.434344 — Posted: 2021-03-08

Monitoring deep-tissue oxygenation with a millimeter-scale ultrasonic implant

Sonmezoglu, S., Fineman, J. R., Maltepe, E., Maharbiz, M. M.

10.1101/2021.03.05.434129 — Posted: 2021-03-05

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