Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

4005 Articles

Short tandem repeats bind transcription factors to tune eukaryotic gene expression

Horton, C. A., Alexandari, A. M., Hayes, M. G. B., Marklund, E., Schaepe, J. M., Aditham, A. K., Shah, N., Shrikumar, A. A., Afek, A., Greenleaf, W. J., Gordan, R., Zeitlinger, J., Kundaje, A., Fordyce, P. M.

10.1101/2022.05.24.493321 — Posted: 2022-05-30

Social Determinants of Health and Suicidal Behaviors among Children: U.S. Longitudinal Adolescent Brain Cognitive Development (ABCD) Study

Xiao, Y., Mann, J. J., Hou, Y., Chow, J. C.-C., Brown, T. T., Yip, P. S.-F., Tsai, A. C., Wang, F., Su, C.

10.1101/2022.05.26.22275629 — Posted: 2022-05-30

Charting a narrow course for direct electron uptake-facilitated electromicrobial production

Abel, A. J., Adams, J. D., Hilzinger, J. M., Arkin, A. P.

10.1101/2022.05.28.493842 — Posted: 2022-05-29

DLPFC-tDCS unable to modulate mind-wandering propensity nor underlying functional or effective brain connectivity.

Coulborn, S., Fernandez-Espejo, D.

10.1101/2022.05.26.493632 — Posted: 2022-05-29

An Empirical Bayes Method for Differential Expression Analysis of Single Cells with Deep Generative Models

Boyeau, P., Regier, J., Gayoso, A., Jordan, M. I., Lopez, R., Yosef, N.

10.1101/2022.05.27.493625 — Posted: 2022-05-29

IDPConformerGenerator: A Flexible Software Suite for Sampling Conformational Space of Disordered Protein States

Teixeira, J. M. C., Liu, Z. H., Namini, A., Li, J., Vernon, R. M., Krzeminski, M., Shamandy, A. A., Zhang, O., Haghighatlari, M., Yu, L., Head-Gordon, T., Forman-Kay, J. D.

10.1101/2022.05.28.493726 — Posted: 2022-05-29

G protein-coupled receptor 151 regulates glucose metabolism and hepatic gluconeogenesis

Bielczyk-Maczynska, E., Zhao, M., Zushin, P.-J. H., Schnurr, T. M., Kim, H.-J., Li, J., Nallagatla, P., Sangwung, P., Park, C., Cornn, C., Stahl, A., Svensson, K. J., Knowles, J. W.

10.1101/2022.05.25.493489 — Posted: 2022-05-28

Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq

Replogle, J. M., Saunders, R. A., Pogson, A. N., Hussmann, J. A., Lenail, A., Guna, A., Mascibroda, L., Wagner, E. J., Adelman, K., Lithwick-Yanai, G., Iremadze, N., Oberstrass, F., Lipson, D., Bonnar, J. L., Jost, M., Norman, T. M., Weissman, J. S.

10.1101/2021.12.16.473013 — Posted: 2022-05-28

Evolutionary rescue is promoted in compact cellular populations

Aif, S., Appold, N., Kampman, L., Hallatschek, O., Kayser, J.

10.1101/2022.05.27.493727 — Posted: 2022-05-28

OxPhos Dysfunction Causes Hypermetabolism and Reduces Lifespan in Cells and in Patients with Mitochondrial Diseases

Sturm, G., Karan, K. R., Monzel, A., Santhanham, B. S., Taivassalo, T., Bris, C., Duplaga, S. A., Cross, M., Towheed, A., Higgins-Chen, A., McManus, M. J., Cardenas, A., Lin, J., Epel, E. S., Rahman, S., Vissing, J., Grassi, B., Levine, M., Horvath, S., Haller, R. G., Lenaers, G., Wallace, D. C., Tavazoie, S., Procaccio, V., Kaufman, B. A., Seifert, E. L., Hirano, M., Picard, M.

10.1101/2021.11.29.470428 — Posted: 2022-05-28

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