Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

3612 Articles

Structural variants in human congenital heart disease disrupt distal genomic regulatory contacts of developmental genes

Lee, J., Wu, J., Pittman, M., Grant, Z., Kuang, S., Quait, D., Morton, S., Fudenberg, G., Traglia, M., Hayes, K., Pediatric Cardiac Genomics Consortium, , Kumar, R., Bruneau, B., Pollard, K. S.

10.64898/2026.02.28.708767 — Posted: 2026-03-02

Comparing computable structured phenotype- versus large language model-identification of opioid use disorder using electronic health record data

Molina, M. F., Fenton, C., LeSaint, K. T., Pimentel, S. D., Kohn, M. A., Kornblith, A. E.

10.64898/2025.12.17.25342510 — Posted: 2026-02-28

Clinical, in vitro, and in vivo evidence of WAPL as a novel cohesinopathy gene and phenotypic driver of 10q22.3q23.2 genomic disorder

Boone, P. M., Erdin, S., Mohamed, A., Haghshenas, S., Faour, K. N. W., Kao, E., Fu, J., Auwerx, C., Harripaul, R., Jana, B., Springer, D., Hallstrom, G., de Esch, C. E. F., Denhoff, E., Holmes, L., Mohajeri, K., Lemanski, J., Kerkhof, J., McConkey, H., Rzasa, J., McCune, M. J., Levy, M. A., Grafstein, J., Larson, M., Wright, Z., Beauchamp, R. L., Lucente, D., Abou Jamra, R., Agrawal, N., Agrawal, P. B., Andersen, E. F., Argilli, E., Araiza, R., Ballal, S., Baxter, M. F., Bergant, G., Bertsche, A., Bhavsar, R., Bortola, D. R., Bothe, V., Brasch-Andersen, C., Braun, D., Bruel, A.-L., Buchanan, C

10.64898/2026.02.23.26346364 — Posted: 2026-02-28

Differential Methylation by Early Life Adversity in the Future of Families Child Wellbeing Study

Dumas Ang, S., Chin, S., Schneper, L. M., Johnston, R. A., Koss, K. J., Mitchell, C., Notterman, D. A., Engelhardt, B. E., Pena, C. J.

10.64898/2026.02.27.708594 — Posted: 2026-02-28

Cognitive and Behavioral Functioning in Female Former Soccer Players: Results from the Head Impact and Trauma Surveillance Study (HITSS)

Mulayi, S. C., Aaronson, A., Goostrey, K. J., Tuz-Zahra, F., Tripodis, Y., Cole-French, W. S., Roebuck, M., Schneider, G., Pine, B. N., Palmisano, J. N., Martin, B. M., Zavitz, K. H., Katz, D. I., Nowinski, C. J., McKee, A. C., Stein, T. D., Mackin, R. S., McClean, M. D., Weuve, J., Mez, J., Weiner, M. W., Nosheny, R. L., Alosco, M. L., Stern, R. A.

10.64898/2026.02.25.26347083 — Posted: 2026-02-27

Estimating malaria attributable fraction using quantitative PCR in a longitudinal cohort in Eastern Uganda

Martin, A., Wang, Q., Babirye, S., Arinaitwe, E., Zedi, M., Ssewanyana, I., Namirimu, F. N., Nayebare, P., Olwoch, P., Tukwasibwe, S., Jagannathan, P., Nankabirwa, J. I., Kamya, M., Dorsey, G., Greenhouse, B., Briggs, J., Rodriguez-Barraquer, I.

10.64898/2026.02.24.26347052 — Posted: 2026-02-27

Protein-guided RNA barcoding links transcriptomes to synaptic architecture

Urke, A., Dolan, M.-J., Silverman, J., Kim, M. T., Pineda, J., Garcia, S., Luu, J., Buckley, A., Kumar, V., Zhao, B., Chan, K., Nadaf, N., Balderrama, K. S., Arnold, D. B., Stevens, B., Deverman, B. E., Macosko, E. Z.

10.64898/2026.02.26.705527 — Posted: 2026-02-27

Power is a major confounder in the analysis of cross-ancestry 'portability' in human eQTLs

Gibbs, P. M., Beasley, I. J., Del Azodi, C. B., McCarthy, D. J., Gallego Romero, I.

10.64898/2026.02.26.708346 — Posted: 2026-02-27

Redefining kidney disease: Clinico-pathological and molecular findings from the Kidney Precision Medicine Project

Limonte, C. P., Schaub, J. A., Fallegger, R., Menon, R., Schmidt, I. M., de Boer, I. H., Parikh, C., Alpers, C. E., Caramori, M. L., Rosas, S., Mottl, A., Brosius, F., Tuttle, K., Lash, J., Saez-Rodriguez, J., Mariani, L. H., Ricardo, A. C., Eadon, M. T., Ju, W., Henderson, J., Barisoni, L., Hodgin, J. B., Zelnick, L. R., Sharma, K., Spraggins, J., Srivastava, A., Schrauben, S., Weir, M., Hsu, C.-y., Kelly, T., Taliercio, J., Rincon-Choles, H., Dubin, R., Cohen, D. L., Xie, D., Chen, J., He, J., Anderson, A. H., Kretzler, M., Himmelfarb, J., And the CRIC Study Investigators, , And the Kidney

10.64898/2026.02.24.26347022 — Posted: 2026-02-26

Bradykinin Contributes to Vasogenic Edema in Murine Experimental Cerebral Malaria

Pinheiro, A. d. S., Teixeira, D. E., Silva-Aguiar, R. P., Shim, Y. J., Merkulova, A., Silbak, S., Skomorovska-Prokvolit, Y., Midem, D., Ogolla, S., Burckhardt, B. B., Gangnus, T., Scharfstein, J., Caruso-Neves, C., McCarty, O. J., Gailani, D., Bader, M., Rosenthal, P., Dent, A. E., Janse, C. J., McCrae, K., Pinheiro, A. A. d. S., Kazura, J. W., Schmaier, A. H.

10.64898/2026.02.23.704410 — Posted: 2026-02-26

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