bioRxiv/medRxiv TRiP Review Activity

37 Reviews — Review Commons — Systems Biology

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Macrophages maintain signaling fidelity in response to ligand mixtures
Guo, X., Sen, S., Gonzalez, J., Hoffmann, A.
10.1101/2025.03.27.645368 — Posted: 2025-04-01 — Discussion: 2026-02-14  Review Commons
Identifying and targeting abnormal mitochondrial localization associated with psychoses
Haghighi, M., McPhie, D., Rohban, M., Logan, D. J., Haslum, J. F., Ewald, J. D., Karhohs, K. W., Weisbart, E., Cimini, B. A., Singh, S., Cohen, B. M., Carpenter, A. E.
10.1101/2025.10.08.676630 — Posted: 2025-10-08 — Discussion: 2026-02-11  Review Commons
Integrated metabolomics data analysis to generate mechanistic hypotheses with MetaProViz
Schmidt, C., Turei, D., Prymidis, D., Daley, M., Frezza, C., Saez-Rodriguez, J.
10.1101/2025.08.18.670781 — Posted: 2025-08-22 — Discussion: 2026-02-09  Review Commons
From Noise to Models to Numbers: Evaluating Negative Binomial Models and Parameter Estimations in Single-Cell RNA-seq
Wang, Y., Shu, Z., Cao, Z., Grima, R.
10.1101/2025.05.05.652189 — Posted: 2025-05-12 — Discussion: 2025-12-17  Review Commons
Ubiquitous systems drift in the evolution of development
van der Jagt, P. L., Oud, S., Vroomans, R. M. A.
10.1101/2025.04.23.650280 — Posted: 2025-04-23 — Discussion: 2025-10-30  Review Commons
Unveiling Gene Perturbation Effects through Gene Regulatory Networks Inference from single-cell transcriptomic data
Corridori, C., Romeike, M., Nicoletti, G., Buecker, C., Suweis, S., Azaele, S., Martello, G.
10.1101/2024.05.10.593314 — Posted: 2024-05-10 — Discussion: 2025-10-21  Review Commons
Multi-omics analysis of endothelial cells reveals the metabolic diversity that underlies endothelial cell functions
Durot, S., Doubleday, P. F., Schulla, L., Sabine, A., Petrova, T. V., Zamboni, N.
10.1101/2025.03.03.641143 — Posted: 2025-03-05 — Discussion: 2025-09-15  Review Commons
A push-pull system of repressors matches levels of glucose transporters to extracellular glucose in budding yeast
Montano-Gutierrez, L. F., Sturrock, M., Farquhar, I. L., Correia, K., Shahrezaei, V., Swain, P. S.
10.1101/2021.04.20.440667 — Posted: 2021-04-21 — Discussion: 2025-08-11  Review Commons
Regulation of replication timing in Saccharomyces cerevisiae
Berners-Lee, R., Gilmore, E., Berkemeier, F., Boemo, M. A.
10.1101/2024.10.11.617780 — Posted: 2024-10-15 — Discussion: 2025-02-21  Review Commons
Hormone circuit analysis explains why most HPA drugs fail for mood disorders and predicts the few that work
Milo, T., Nir Halber, S., Raz, M., Mayo, A., Alon, U.
10.1101/2024.06.10.598205 — Posted: 2024-06-10 — Discussion: 2025-02-05  Review Commons

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