bioRxiv/medRxiv TRiP Review Activity

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Multi-omics Visualization Platform: An extensible Galaxy plug-In for multi-omics data visualization and exploration
McGowan, T., Johnson, J. E., Kumar, P., Sajulga, R., Mehta, S., Jagtap, P. D., Griffin, T. J.
10.1101/842856 — Posted: 2019-11-15 — Discussion: 2022-01-23  GigaScience
Aequatus: An open-source homology browser
Anil S. Thanki, Sarah Ayling, Javier Herrero, Robert P. Davey
10.1101/055632 — Posted: 2016-05-27 — Discussion: 2022-01-22  GigaScience
Network based conditional genome wide association analysis of human metabolomics
Tsepilov, Y. A., Sharapov, S. Z., Zaytseva, O. O., Krumsiek, J., Prehn, C., Adamski, J., Kastenmuller, G., Wang-Sattler, R., Strauch, K., Gieger, C., Aulchenko, Y. S.
10.1101/096982 — Posted: 2016-12-27 — Discussion: 2022-01-22  GigaScience
Single molecule, full-length transcript sequencing provides insight into the extreme metabolism of ruby-throated hummingbird Archilochus colubris
Workman, R. E., Myrka, A. M., Tseng, E., Wong, G. W., Welch, K. C., Timp, W.
10.1101/117218 — Posted: 2017-03-15 — Discussion: 2022-01-22  GigaScience
Advanced Lesion Symptom Mapping Analyses And Implementation As BCBtoolkit
Foulon, C., Cerliani, L., Kinkingnehun, S., Levy, R., Rosso, C., Urbanski, M., Volle, E., Thiebaut de Schotten, M.
10.1101/133314 — Posted: 2017-05-02 — Discussion: 2022-01-22  GigaScience
ANNOgesic: A Pipeline To Translate Bacterial/Archaeal RNA-Seq Data Into High-Resolution Genome Annotations
Yu, S.-H., Vogel, J., Foerstner, K. U.
10.1101/143081 — Posted: 2017-05-27 — Discussion: 2022-01-22  GigaScience
Experimenting with reproducibility in bioinformatics
Kim, Y.-M., Poline, J.-B., Dumas, G.
10.1101/143503 — Posted: 2017-06-20 — Discussion: 2022-01-22  GigaScience
Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics and epigenetics data
Nguyen, Q. H., Tellam, R. L., Naval-Sanchez, M., Porto-Neto, L., Barendse, B. W., Reverter-Gomez, T., Hayes, B., Kijas, J., Dalrymple, B. P.
10.1101/143990 — Posted: 2017-06-05 — Discussion: 2022-01-22  GigaScience
PhenoSpD: an atlas of phenotypic correlations and a multiple testing correction for the human phenome
Zheng, J., Richardson, T., Millard, L., Hemani, G., Raistrick, C., Vilhjalmsson, B., Haycock, P., Gaunt, T.
10.1101/148627 — Posted: 2017-06-10 — Discussion: 2022-01-22  GigaScience
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
Parekh, S., Ziegenhain, C., Vieth, B., Enard, W., Hellmann, I.
10.1101/153940 — Posted: 2017-06-22 — Discussion: 2022-01-22  GigaScience

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