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101 Reviews — EMBO Press — Systems Biology

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An integrative machine learning approach for prediction of toxicity-related drug safety
Lysenko, A., Sharma, A., Boroevich, K., Tsunoda, T.
10.1101/455667 — Posted: 2018-10-29 — Discussion: 2019-09-22  EMBO Press
Non-canonical circadian oscillations in Drosophila S2 cells drive gene-expression cycles coupled to metabolic oscillations
Rey, G., Milev, N. B., Valekunja, U. K., Ch, R., Ray, S., Silva Dos Santos, M., Nagy, A. D., Antrobus, R., MacRae, J. I., Reddy, A. B.
10.1101/191338 — Posted: 2017-09-20 — Discussion: 2019-09-22  EMBO Press
Measuring error rates in genomic perturbation screens: gold standards for human functional genomics
Traver Hart, Kevin R Brown, Fabrice Sircoulomb, Robert Rottapel, Jason Moffat
10.1101/003327 — Posted: 2014-03-17 — Discussion: 2019-09-22  EMBO Press
A synthesis of over 9,000 mass spectrometry experiments reveals the core set of human protein complexes
Drew, K., Lee, C., Huizar, R. L., Tu, F., Borgeson, B., McWhite, C. D., Ma, Y., Wallingford, J. B., Marcotte, E. M.
10.1101/092361 — Posted: 2016-12-07 — Discussion: 2019-09-22  EMBO Press
Evidence that the cell cycle is a series of uncoupled, memoryless phases
Chao, H. X., Fakhreddin, R. I., Shimerov, H. K., Kumar, R. J., Gupta, G. P., Purvis, J. E.
10.1101/283614 — Posted: 2018-03-16 — Discussion: 2019-09-22  EMBO Press
Ratiometric Distribution Of OCT4 During Stem Cell Division Controls The Balance Between Self-Renewal And Differentiation
Wolff, S. C., Dumitru, R., Dungee, C. D., Kedziora, K. M., Haggerty, R. A., Cheng, J., Beltran, A. S., Purvis, J. E.
10.1101/137299 — Posted: 2017-05-12 — Discussion: 2019-09-22  EMBO Press
Deciphering microbial interactions in synthetic human gut microbiome communities
Venturelli, O. S., Carr, A. C., Fisher, G., Hsu, R. H., Lau, R., Bowen, B. P., Northen, T., Arkin, A. P.
10.1101/228395 — Posted: 2017-12-03 — Discussion: 2019-09-22  EMBO Press
Antisense transcription-dependent chromatin signature modulates sense transcription and transcript dynamics
Brown, T., Howe, F. S., Murray, S. C., Seward, E., Rata, S., Angel, A., Mellor, J.
10.1101/187237 — Posted: 2017-09-11 — Discussion: 2019-09-22  EMBO Press
A living vector field reveals constraints on galactose network induction in yeast
Sarah R. Stockwell, Scott A. Rifkin
10.1101/073817 — Posted: 2016-09-06 — Discussion: 2019-09-22  EMBO Press
Multi-region proteome analysis quantifies spatial heterogeneity of prostate tissue biomarkers
Guo, T., Li, L., Zhong, Q., Rupp, N. J., Charmpi, K., Wong, C. E., Wagner, U., Rueschoff, J. H., Jochum, W., Fankhauser, C., Saba, K., Poyet, C., Wild, P. J., Aebersold, R., Beyer, A.
10.1101/250167 — Posted: 2018-01-18 — Discussion: 2019-09-22  EMBO Press

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