bioRxiv/medRxiv TRiP Review Activity

251 Reviews — All Partners — Systems Biology

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Affected cell types for hundreds of Mendelian diseases revealed by analysis of human and mouse single-cell data
Hekselman, I., Vital, A., Ziv-Agam, M., Kerber, L., Yeger-Lotem, E.
10.1101/2022.10.29.513906 — Posted: 2022-10-31 — Discussion: 2023-10-03  eLife
Multi-omic analysis of bat versus human fibroblasts reveals altered central metabolism
Jagannathan, N. S., Koh, J. Y. P., Lee, Y., Sobota, R. M., Irving, A. T., Wang, L.-F., Itahana, Y., Itahana, K., Tucker-Kellogg, L. C.
10.1101/2023.05.08.537600 — Posted: 2023-05-09 — Discussion: 2023-10-03  Review Commons
Identifying Spatial Co-occurrence in Healthy and InflAmed tissues (ISCHIA)
Lafzi, A., Borrelli, C., Bach, K., Kretz, J. A., Handler, K., Regan-Komito, D., Ficht, X., Frei, A. P., Moor, A. E.
10.1101/2023.02.13.526554 — Posted: 2023-02-15 — Discussion: 2023-10-03  Review Commons
Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease
Ramirez Flores, R. O., Lanzer, J. D., Dimitrov, D., Velten, B., Saez-Rodriguez, J.
10.1101/2023.02.23.529642 — Posted: 2023-02-23 — Discussion: 2023-09-28  Review Commons
Homeostasis, injury and recovery dynamics at multiple scales in a self-organizing intestinal crypt
Gall, L., Duckworth, C., Jardi, F., Lammens, L., Parker, A., Bianco, A., Kimko, H., Pritchard, D. M., Pin, C.
10.1101/2022.12.18.520934 — Posted: 2022-12-19 — Discussion: 2023-09-27  eLife
Systems Level Identification Of A Matrisome-Associated Macrophage Polarization State In Multi-Organ Fibrosis
Huang, K. Y., Mishra, K., Park, H., Xie, Y., Ouyang, J. F., Petretto, E., Behmoaras, J.
10.1101/2022.12.20.521178 — Posted: 2022-12-20 — Discussion: 2023-09-06  eLife
Robust dimethyl-based multiplex-DIA workflow doubles single-cell proteome depth via a reference channel
Thielert, M., Itang, C. E. M., Ammar, C., Schober, F. A., Bludau, I., Skowronek, P., Wahle, M., Zeng, W.-F., Zhou, X.-X., Brunner, A.-D., Richter, S., Theis, F. J., Steger, M., Mann, M.
10.1101/2022.12.02.518917 — Posted: 2022-12-03 — Discussion: 2023-09-01  EMBO Press
A new pipeline SPICE identifies novel JUN-IKZF1 composite elements
Li, P., Pulugulla, S. H., Das, S., Oh, J., Spolski, R., Lin, J.-X., Leonard, W. J.
10.1101/2023.05.31.543110 — Posted: 2023-06-05 — Discussion: 2023-08-24  eLife
Multiomics Analyses Reveal Dynamic Bioenergetic Pathways and Functional Remodeling of the Heart During Intermittent Fasting
Arumugam, T. V., Alli-Shaik, A., Liehn, E. A., Selvaraji, S., Poh, L., Rajeev, V., Kim, J., Swa, H. L. F., Hao, D. T. Z., Ratttanasopa, C., Fann, D. Y.-W., Mayan, D. C., Ng, G. Y.-Q., Baik, S.-H., Mallilankaraman, K., Gelderblom, M., Drummond, G. R., Sobey, C. G., Kennedy, B. K., Jo, D.-G., Singaraja, R. R., Mattson, M. P., Gunaratne, J.
10.1101/2021.03.04.433999 — Posted: 2021-03-05 — Discussion: 2023-08-07  eLife
A hierarchical model for external electrical control of an insect, accounting for inter-individual variation of muscle force properties
Owaki, D., Dürr, V., Schmitz, J.
10.1101/2022.12.19.521014 — Posted: 2022-12-21 — Discussion: 2023-07-19  eLife

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