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Whole genome hybrid assembly and protein-coding gene annotation of the entirely black native Korean chicken breed Yeonsan Ogye
Sohn, J.-i., Nam, K., Kim, J.-M., Lim, D., Lee, K.-T., Do, Y. J., Cho, C. Y., Kim, N., Nam, J.-W., Chae, H.-H.
10.1101/224311 — Posted: 2017-11-24 — Discussion: 2022-01-22  GigaScience
BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
Huang, M., Liu, X., Zhou, Y., Summers, R. M., Zhang, Z.
10.1101/227249 — Posted: 2017-11-30 — Discussion: 2022-01-22  GigaScience
AMBER: Assessment of Metagenome BinnERs
Meyer, F., Hofmann, P., Belmann, P., Garrido-Oter, R., Fritz, A., Sczyrba, A., McHardy, A. C.
10.1101/239582 — Posted: 2017-12-25 — Discussion: 2022-01-22  GigaScience
NanoAmpli-Seq: A workflow for amplicon sequencing from mixed microbial communities on the nanopore sequencing platform
Calus, S. T., Ijaz, U. Z., Pinto, A. J.
10.1101/244517 — Posted: 2018-01-07 — Discussion: 2022-01-22  GigaScience
SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution
Xia, L. C., Ai, D., Lee, H., Andor, N., Li, C., Zhang, N. R., Ji, H. P.
10.1101/247536 — Posted: 2018-01-12 — Discussion: 2022-01-22  GigaScience
Genomes of trombidid mites reveal novel predicted allergens and laterally-transferred genes associated with secondary metabolism
Dong, X., Chaisiri, K., Xia, D., Armstrong, S. D., Fang, Y., Donnelly, M. J., Kadowaki, T., McGarry, J. W., Darby, A. C., Makepeace, B. L.
10.1101/259044 — Posted: 2018-02-02 — Discussion: 2022-01-22  GigaScience
Ximmer: A System for Improving Accuracy and Consistency of CNV Calling from Exome Data
Sadedin, S., Ellis, J., Masters, S., Oshlack, A.
10.1101/260927 — Posted: 2018-02-06 — Discussion: 2022-01-22  GigaScience
SV-plaudit: A cloud-based framework for manually curating thousands of structural variants
Belyeu, J. R., Nicholas, T. J., Pedersen, B. S., Sasani, T. A., Havrilla, J. M., Kravitz, S. N., Conway, M. E., Lohman, B. K., Quinlan, A. R., Layer, R. M.
10.1101/265058 — Posted: 2018-02-14 — Discussion: 2022-01-22  GigaScience
MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data
Simon, L. M., Karg, S., Westermann, A. J., Engel, M., Elbehery, A. H., Hense, B., Heinig, M., Deng, L., Theis, F. J.
10.1101/269092 — Posted: 2018-02-22 — Discussion: 2022-01-22  GigaScience
Clustering trees: a visualisation for evaluating clusterings at multiple resolutions
Zappia, L., Oshlack, A.
10.1101/274035 — Posted: 2018-03-02 — Discussion: 2022-01-22  GigaScience

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