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rCASC: reproducible Classification Analysis of Single Cell sequencing data
Alessandri, L., Beccuti, M., Arigoni, M., Olivero, M., Romano, G., De Libero, G., Pace, L., Cordero, F., Calogero, R.
10.1101/430967 — Posted: 2018-10-03 — Discussion: 2022-01-31  GigaScience
A field guide for the compositional analysis of any-omics data
Quinn, T. P., Erb, I., Gloor, G., Notredame, C., Richardson, M. F., Crowley, T. M.
10.1101/484766 — Posted: 2018-12-03 — Discussion: 2022-01-31  GigaScience
VAPPER: High-throughput Variant Antigen Profiling in African trypanosomes
Silva Pereira, S., Heap, J., Jones, A. R., Jackson, A. P.
10.1101/492074 — Posted: 2018-12-10 — Discussion: 2022-01-31  GigaScience
SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
Wiewiorka, M., Szmurlo, A., Kusmirek, W., Gambin, T.
10.1101/494468 — Posted: 2018-12-13 — Discussion: 2022-01-31  GigaScience
Draft genome sequence of the Solanum aethiopicum provides insights into disease resistance, drought tolerance and the evolution of the genome
Song, B., Song, Y., Fu, Y., Kizito, E. B., Kabod, P. N., Liu, H., Kamenya, S. N., Muthemba, S., Kariba, R., Li, X., Wang, S., Cheng, S., Muchugi, A., Jamnadass, R., Shapiro, H.-Y., Deynze, A. V., Yang, H., Wang, J., Xu, X., Odeny, D. A., Liu, X.
10.1101/532077 — Posted: 2019-01-28 — Discussion: 2022-01-31  GigaScience
The intersectional genetics landscape for human
Macedo, A., Gontijo, A. M.
10.1101/552984 — Posted: 2019-02-18 — Discussion: 2022-01-31  GigaScience
Comparison of single nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga Toxin Producing Escherichia coli.
Dallman, T., Jenkins, C., Gharbia, S., Greig, D.
10.1101/570192 — Posted: 2019-03-06 — Discussion: 2022-01-31  GigaScience
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria
Bayliss, S. C., Thorpe, H. A., Coyle, N. M., Sheppard, S. K., Feil, E. J.
10.1101/598391 — Posted: 2019-04-05 — Discussion: 2022-01-31  GigaScience
Refgenie: a reference genome resource manager
Stolarczyk, M., Reuter, V. P., Magee, N. E., Sheffield, N. C.
10.1101/698704 — Posted: 2019-07-12 — Discussion: 2022-01-31  GigaScience
Novel protein markers of androgen activity in humans: proteomic study of plasma from young chemically castrated men
Giwercman, A., Sahlin, B., Pla Parada, I., Pawlowski, K., Fehninger, C., Lundberg Giwercman, Y., Leijonhufvud, I., Appelqvist, R., Marko-Varga, G., Sanchez, A., Malm, J.
10.1101/2021.11.12.21266270 — Posted: 2021-11-14 — Discussion: 2022-01-31  eLife

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