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EWAS-Galaxy: a tools suite for population epigenetics integrated into Galaxy
Murat, K., Gruning, B., Poterlowicz, P. W., Westgate, G., Tobin, D. J., Poterlowicz, K.
10.1101/553784 — Posted: 2019-02-19 — Discussion: 2022-01-24  GigaScience
Gene-Set Enrichment with Mathematical Biology (GEMB)
Cochran, A., Forger, D., Zöllner, S., McInnis, M.
10.1101/554212 — Posted: 2019-02-18 — Discussion: 2022-01-24  GigaScience
Reduced chromatin accessibility underlies gene expression differences in homologous chromosome arms of hexaploid wheat and diploid Aegilops tauschii
Lu, F.-H., McKenzie, N., Gardiner, L.-J., Luo, M., Hall, A., Bevan, M. W.
10.1101/571133 — Posted: 2019-03-07 — Discussion: 2022-01-24  GigaScience
A web-server framework to explore and visualize large genomic variation data in lab and its applications to wheat and its progenitors
Wang, W., Wang, Z., Li, X., Ni, Z., Hu, Z., Xin, M., Peng, H., Yao, Y., Sun, Q., Guo, W.
10.1101/626705 — Posted: 2019-05-16 — Discussion: 2022-01-24  GigaScience
Is it time to replace gzip? Comparison of modern compressors for molecular sequence databases
Kryukov, K., Ueda, M. T., Nakagawa, S., Imanishi, T.
10.1101/642553 — Posted: 2019-05-20 — Discussion: 2022-01-24  GigaScience
An improved pig reference genome sequence to enable pig genetics and genomics research
Warr, A., Affara, N., Aken, B., Beiki, H., Bickhart, D. M., Billis, K., Chow, W., Eory, L., Finlayson, H. A., Flicek, P., Giron, C. G., Griffin, D. K., Hall, R., Hannum, G., Hourlier, T., Howe, K., Hume, D. A., Izuogu, O., Kim, K., Koren, S., Liu, H., Manchanda, N., Martin, F. J., Nonneman, D. J., O'Connor, R. E., Phillippy, A. M., Rohrer, G. A., Rosen, B. D., Rund, L. A., Sargent, C. A., Schook, L. B., Schroeder, S. G., Schwartz, A. S., Skinner, B. M., Talbot, R., Tseng, E., Tuggle, C. K., Watson, M., Smith, T. P., Archibald, A. L.
10.1101/668921 — Posted: 2019-06-13 — Discussion: 2022-01-24  GigaScience
Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data
Batra, S. S., Levy-Sakin, M., Robinson, J., Guillory, J., Durinck, S., Kwok, P.-Y., Cox, L. A., Seshagiri, S., Song, Y. S., Wall, J. D.
10.1101/678771 — Posted: 2019-06-24 — Discussion: 2022-01-24  GigaScience
Draft genome assemblies using sequencing reads from Oxford Nanopore Technology and Illumina platforms for four species of North American killifish from the Fundulus genus
Johnson, L. K., Sahasrabudhe, R., Gill, T., Roach, J. L., Froenicke, L., Brown, C. T., Whitehead, A.
10.1101/686246 — Posted: 2019-06-28 — Discussion: 2022-01-24  GigaScience
Multivariate GWAS: Generalized Linear Models, Prior Weights, and Double Sparsity
Chu, B. B., Keys, K. L., Sinsheimer, J. S., Lange, K.
10.1101/697755 — Posted: 2019-07-11 — Discussion: 2022-01-24  GigaScience
Global Analysis of Human mRNA Folding Disruptions in Synonymous Variants Demonstrates Significant Population Constraint
Gaither, J. B. S., Lammi, G. E., Li, J. L., Gordon, D. M., Kuck, H. C., Kelly, B. J., Fitch, J. R., White, P.
10.1101/712679 — Posted: 2019-07-24 — Discussion: 2022-01-24  GigaScience

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