bioRxiv/medRxiv TRiP Review Activity

118 Reviews — Gigabyte — All Subjects

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Building a novel nuclear-organelle genomic framework for the fever tree (Cinchona pubescens Vahl) through short and long-read DNA data assemblies
Canales, N. A., Perez Escobar, O. A., Powell, R., Topel, M., Kidner, C., Nesbitt, M., Maldonado, C., Barnes, C., Ronsted, N., Leitch, I., Antonelli, A.
10.1101/2022.04.25.489452 — Posted: 2022-04-26 — Discussion: 2022-10-08  Gigabyte
svaRetro and svaNUMT: modular packages for annotation of retrotransposed transcripts and nuclear integration of mitochondrial DNA in genome sequencing data
Dong, R., Cameron, D. L., Bedo, J., Papenfuss, A. T.
10.1101/2021.08.18.456578 — Posted: 2021-08-19 — Discussion: 2022-10-08  Gigabyte
A phased, chromosome-scale genome of 'Honeycrisp' apple (Malus domestica)
Khan, A., Carey, S. B., Gomez, A. S., Zhang, H., Hargarten, H., Hale, H., Harkess, A., Honaas, L.
10.1101/2022.08.24.505160 — Posted: 2022-08-25 — Discussion: 2022-10-07  Gigabyte
Genome of a Giant (Trevally): Caranx ignobilis
Pickett, B. D., Glass, J. R., Ridge, P. G., Kauwe, J. S.
10.1101/2021.09.11.459923 — Posted: 2021-09-14 — Discussion: 2022-09-04  Gigabyte
Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
Schultz, D. L., Selberherr, E., Stouthamer, C. M., Doremus, M., Kelly, S. E., Hunter, M. S., Schmitz-Esser, S.
10.1101/2022.08.05.502955 — Posted: 2022-08-05 — Discussion: 2022-09-04  Gigabyte
First De novo whole genome sequencing and assembly of mutant Dendrobium hybrid cultivar 'Emma White'
Sherpa, R., Devadas, R., Penna, S., Bolbhat, S. N., Nikam, T.
10.1101/2022.06.25.497579 — Posted: 2022-06-29 — Discussion: 2022-08-09  Gigabyte
The Genome of the Mustard Hill Coral, Porites astreoides
Wong, K. H., Putnam, H. M.
10.1101/2022.07.01.498470 — Posted: 2022-07-03 — Discussion: 2022-08-08  Gigabyte
Long-read HiFi Sequencing Correctly Assembles Repetitive heavy fibroin Silk Genes in New Moth and Caddisfly Genomes
Kawahara, A. Y., Storer, C. G., Markee, A., Heckenhauer, J., Powell, A., Plotkin, D., Hotaling, S., Cleland, T. P., Dikow, R. B., Dikow, T., Kuranishi, R. B., Messcher, R., Pauls, S. U., Stewart, R. J., Tojo, K., Frandsen, P. B.
10.1101/2022.06.01.494423 — Posted: 2022-06-03 — Discussion: 2022-07-22  Gigabyte
A chromosome-level genome assembly and annotation of a maize elite breeding line Dan340
Zhao, Y., Wang, Y., Ma, D., Feng, G., Huo, Y., Liu, Z., Zhou, L., Zhang, Y., Xu, L., Wang, L., Zhao, H., Zhao, J., Wang, F.
10.1101/2021.04.26.441299 — Posted: 2021-04-26 — Discussion: 2022-06-21  Gigabyte
The Lithuanian reference genome LT1 - a human de novo genome assembly with short and long read sequence and Hi-C data
Kim, H.-S., Blazyte, A., Jeon, S., Yoon, C., Kim, Y., Kim, C., Bolser, D., Ahn, J.-H., Edwards, J. S., Bhak, J.
10.1101/2021.04.05.438426 — Posted: 2021-04-05 — Discussion: 2022-06-21  Gigabyte

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