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GenPipes: an open-source framework for distributed and scalable genomic analyses
Bourgey, M., Dali, R., Eveleigh, R., Chen, K. C., Letourneau, L., Fillon, J., Michaud, M., Caron, M., Sandoval, J., Lefebvre, F., Leveque, G., Mercier, E., Bujold, D., Marquis, P., Tran Van, P., Morais, D., Tremblay, J., Shao, X., Henrion, E., Gonzalez, E., Quirion, P.-O., Caron, B., Bourque, G.
10.1101/459552 — Posted: 2018-11-01 — Discussion: 2022-01-23  GigaScience
duphold: scalalable, depth-based annotation and curation of high-confidence structural variant calls.
Pedersen, B. S., Quinlan, A. R.
10.1101/465385 — Posted: 2018-11-08 — Discussion: 2022-01-23  GigaScience
Laniakea: an open solution to provide Galaxy \"on-demand\" instances over heterogeneous cloud infrastructures.
Tangaro, M. A., Donvito, G., Antonacci, M., Chiara, M., Mandreoli, P., Pesole, G., Zambelli, F.
10.1101/472464 — Posted: 2018-11-19 — Discussion: 2022-01-23  GigaScience
Evaluating the Genome and Resistome of Extensively Drug-Resistant Klebsiella pneumoniae using Native DNA and RNA Nanopore Sequencing
Pitt, M., Nguyen, S. H. H., Duarte, T. P. S., Blaskovich, M., Cooper, M., Coin, L.
10.1101/482661 — Posted: 2018-11-29 — Discussion: 2022-01-23  GigaScience
Ultra-deep, long-read nanopore sequencing of mock microbial community standards
Nicholls, S. M., Quick, J. C., Tang, S., Loman, N. J.
10.1101/487033 — Posted: 2018-12-04 — Discussion: 2022-01-23  GigaScience
A chromosome-scale assembly of the major African malaria vector Anopheles funestus
Ghurye, J., Koren, S., Small, S. T., Redmond, S., Howell, P., Phillippy, A. M., Besansky, N. J.
10.1101/492777 — Posted: 2018-12-10 — Discussion: 2022-01-23  GigaScience
Discovering Data Access and Use Requirements Using the Data Tags Suite (DATS) Model
Alter, G., Gonzalez-Beltran, A., Ohno-Machado, L., Rocca-Serra, P.
10.1101/518571 — Posted: 2019-01-11 — Discussion: 2022-01-23  GigaScience
High-throughput phenotyping with deep learning gives insight into the genetic architecture of flowering time in wheat
Wang, X., Xuan, H., Evers, B., Shrestha, S., Pless, R., Poland, J.
10.1101/527911 — Posted: 2019-01-23 — Discussion: 2022-01-23  GigaScience
Evaluation of computational genotyping of Structural Variations for clinical diagnoses.
Chander, V., Gibbs, R. A., Sedlazeck, F. J.
10.1101/558247 — Posted: 2019-02-22 — Discussion: 2022-01-23  GigaScience
A collection of yeast cellular electron cryotomography data
Gan, L., Ng, C. T., Chen, C., Cai, S.
10.1101/594432 — Posted: 2019-04-05 — Discussion: 2022-01-23  GigaScience

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