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117 Reviews — eLife — Systems Biology

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Quantitative Geometric Modeling of Blood Cells from X-ray Histotomograms of Whole Zebrafish Larvae
Yakovlev, M. A., Liang, K., Zaino, C. R., Vanselow, D. J., Sugarman, A. L., Lin, A. Y., La Riviere, P. J., Zheng, Y., Silverman, J. D., Liechty, J. C., Huang, S. X., Cheng, K. C.
10.1101/2023.05.23.541939 — Posted: 2023-05-24 — Discussion: 2023-10-16  eLife
Affected cell types for hundreds of Mendelian diseases revealed by analysis of human and mouse single-cell data
Hekselman, I., Vital, A., Ziv-Agam, M., Kerber, L., Yeger-Lotem, E.
10.1101/2022.10.29.513906 — Posted: 2022-10-31 — Discussion: 2023-10-03  eLife
Homeostasis, injury and recovery dynamics at multiple scales in a self-organizing intestinal crypt
Gall, L., Duckworth, C., Jardi, F., Lammens, L., Parker, A., Bianco, A., Kimko, H., Pritchard, D. M., Pin, C.
10.1101/2022.12.18.520934 — Posted: 2022-12-19 — Discussion: 2023-09-27  eLife
Systems Level Identification Of A Matrisome-Associated Macrophage Polarization State In Multi-Organ Fibrosis
Huang, K. Y., Mishra, K., Park, H., Xie, Y., Ouyang, J. F., Petretto, E., Behmoaras, J.
10.1101/2022.12.20.521178 — Posted: 2022-12-20 — Discussion: 2023-09-06  eLife
A new pipeline SPICE identifies novel JUN-IKZF1 composite elements
Li, P., Pulugulla, S. H., Das, S., Oh, J., Spolski, R., Lin, J.-X., Leonard, W. J.
10.1101/2023.05.31.543110 — Posted: 2023-06-05 — Discussion: 2023-08-24  eLife
Multiomics Analyses Reveal Dynamic Bioenergetic Pathways and Functional Remodeling of the Heart During Intermittent Fasting
Arumugam, T. V., Alli-Shaik, A., Liehn, E. A., Selvaraji, S., Poh, L., Rajeev, V., Kim, J., Swa, H. L. F., Hao, D. T. Z., Ratttanasopa, C., Fann, D. Y.-W., Mayan, D. C., Ng, G. Y.-Q., Baik, S.-H., Mallilankaraman, K., Gelderblom, M., Drummond, G. R., Sobey, C. G., Kennedy, B. K., Jo, D.-G., Singaraja, R. R., Mattson, M. P., Gunaratne, J.
10.1101/2021.03.04.433999 — Posted: 2021-03-05 — Discussion: 2023-08-07  eLife
A hierarchical model for external electrical control of an insect, accounting for inter-individual variation of muscle force properties
Owaki, D., Dürr, V., Schmitz, J.
10.1101/2022.12.19.521014 — Posted: 2022-12-21 — Discussion: 2023-07-19  eLife
Leveraging genetic diversity to identify small molecules that reverse mouse skeletal muscle insulin resistance
Masson, S. W., Madsen, S., Cooke, K. C., Potter, M., Vegas, A. D., Carroll, L., Thillainadesan, S., Walder, K. R., Cooney, G. J., Morahan, G., Stöckli, J., James, D. E.
10.1101/2023.03.01.530673 — Posted: 2023-03-03 — Discussion: 2023-07-10  eLife
Genetic and dietary modulators of the inflammatory response in the gastro-intestinal tract of the BXD mouse genetic reference population
Li, X., Morel, J.-D., Benegiamo, G., Poisson, J., Bachmann, A., Rapin, A., Williams, E. G., Perino, A., Schoonjans, K., Bou Sleiman, M. S., Auwerx, J.
10.1101/2023.03.22.533818 — Posted: 2023-03-25 — Discussion: 2023-07-03  eLife
A label-free method to track individuals and lineages of budding cells
Pietsch, J. M. J., Munoz, A. F., Adjavon, D.-Y. A., Farquhar, I., Clark, I. B., Swain, P. S.
10.1101/2022.05.11.491488 — Posted: 2022-05-12 — Discussion: 2023-06-09  eLife

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