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101 Reviews — EMBO Press — Systems Biology

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Mammalian gene expression variability is explained by underlying cell state
Foreman, R., Wollman, R.
10.1101/626424 — Posted: 2019-05-03 — Discussion: 2020-06-04  EMBO Press
Impact of C-terminal amino acid composition on protein expression in bacteria
Weber, M., Burgos, R., Yus, E., Yang, J.-S., Lluch-Senar, M., Serrano, L.
10.1101/751305 — Posted: 2019-08-29 — Discussion: 2020-06-04  EMBO Press
Time-resolved genome-scale profiling reveals a causal expression network
Hackett, S. R., Baltz, E. A., Coram, M., Wranik, B. J., Kim, G., Baker, A., Fan, M., Hendrickson, D. G., Berndl, M., McIsaac, R. S.
10.1101/619577 — Posted: 2019-05-01 — Discussion: 2020-06-04  EMBO Press
Patient-specific logic models of signaling pathways from screenings on cancer biopsies to prioritize personalized combination therapies
Eduati, F., Jaaks, P., Merten, C. A., Garnett, M. J., Saez-Rodriguez, J.
10.1101/422998 — Posted: 2018-09-21 — Discussion: 2020-06-04  EMBO Press
Translational efficiency across healthy and tumor tissues is proliferation-related
Hernandez-Alias, X., Benisty, H., Schaefer, M. H., Serrano, L.
10.1101/782227 — Posted: 2019-09-25 — Discussion: 2020-06-04  EMBO Press
Estrogen receptor alpha controls gene expression via translational offsetting
Lorent, J., Rebello, R. J., van Hoef, V., Lawrence, M. G., Szkop, K. J., Kusnadi, E., Samreen, B., Balanathan, P., Scharmann, K., Takizawa, I., Leidel, S. A., Risbridger, G. P., Topisirovic, I., Larsson, O., Furic, L.
10.1101/507574 — Posted: 2018-12-28 — Discussion: 2019-11-26  EMBO Press
Sufficiency analysis of estrogen responsive enhancers using synthetic activators
Ginley-Hidinger, M., Carleton, J. B., Rodriguez, A. C., Berrett, K. C., Gertz, J.
10.1101/479709 — Posted: 2018-11-26 — Discussion: 2019-11-26  EMBO Press
Functional Compensation Between Hematopoietic Stem Cells In Vivo
Nguyen, L., Wang, Z., Chu, E., Eerdeng, J., Chowdhury, A., Lu, R.
10.1101/236398 — Posted: 2017-12-19 — Discussion: 2019-09-22  EMBO Press
Distinct Cellular States Determine Calcium Signaling Response
Jason Yao, Roy Wollman
10.1101/059287 — Posted: 2016-06-16 — Discussion: 2019-09-22  EMBO Press
From word models to executable models of signaling networks using automated assembly
Gyori, B. M., Bachman, J. A., Subramanian, K., Muhlich, J. L., Galescu, L., Sorger, P. K.
10.1101/119834 — Posted: 2017-03-23 — Discussion: 2019-09-22  EMBO Press

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