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Meta-Prism 2.0: Enabling algorithm for ultra-fast, accurate and memory-efficient search among millions of microbial community samples
Kang, K., Chong, H., Ning, K.
10.1101/2020.11.17.387811 — Posted: 2020-11-20 — Discussion: 2023-03-01  GigaScience
SurvBenchmark: comprehensive benchmarking study of survival analysis methods using both omics data and clinical data
Zhang, Y., Wong, G., Mann, G., Muller, S., Yang, J. Y. H.
10.1101/2021.07.11.451967 — Posted: 2021-07-12 — Discussion: 2023-03-01  GigaScience
Benchmarking ultra-high molecular weight DNA preservation methods for long-read and long-range sequencing
Dahn, H. A., Mountcastle, J., Balacco, J., Winkler, S., Bista, I., Schmitt, A. D., Vinnere Pettersson, O., Formenti, G., Oliver, K., Smith, M., Tan, W., Kraus, A., Mac, S., Komoroske, L. M., Lama, T., Crawford, A. J., Murphy, R. W., Brown, S., Scott, A. F., Morin, P. A., Jarvis, E. D., Fedrigo, O.
10.1101/2021.07.13.451380 — Posted: 2021-07-14 — Discussion: 2023-03-01  GigaScience
DeePVP: Identification and classification of phage virion protein using deep learning
Fang, Z., Feng, T., Zhou, H.
10.1101/2021.10.23.465539 — Posted: 2021-10-24 — Discussion: 2023-03-01  GigaScience
Stardust: improving spatial transcriptomics data analysis through space aware modularity optimization based clustering.
Avesani, S., Viesi, E., Alessandrì, L., Motterle, G., Bonnici, V., Beccuti, M., Calogero, R., Giugno, R.
10.1101/2022.04.27.489655 — Posted: 2022-04-28 — Discussion: 2023-03-01  GigaScience
Genome-wide DNA methylation profiles in smoking discordant and concordant monozygotic twin pairs
van Dongen, J., Willemsen, G., BIOS Consortium, , de Geus, E. J. C., Boomsma, D. I., Neale, M. C.
10.1101/2022.08.17.504357 — Posted: 2022-08-19 — Discussion: 2023-03-01  eLife
Life-course social disparities in body mass index trajectories across adulthood: cohort study evidence from China Health and Nutrition Survey
Dang, Y., Rong, P., Duan, X., Yan, M., Zhao, Y., Mi, B., Zhou, J., Chen, Y., Wang, D., Pei, L.
10.1101/2022.08.23.505012 — Posted: 2022-08-25 — Discussion: 2023-03-01  eLife
PhysiCOOL: A generalized framework for model Calibration and Optimization Of modeLing projects
Goncalves, I. G., Hormuth, D. A., Prabhakaran, S., Phillips, C. M.
10.1101/2022.11.17.516671 — Posted: 2022-11-18 — Discussion: 2023-03-01  Gigabyte
Improvements to the Gulf Pipefish Syngnathus scovelli Genome
Ramesh, B., Small, C., Healey, H., Johnson, B., Barker, E., Currey, M., Bassham, S., Myers, M., Cresko, W., Jones, A.
10.1101/2023.01.23.525209 — Posted: 2023-01-24 — Discussion: 2023-03-01  Gigabyte
APEX2 proximity biotinylation reveals protein dynamics triggered by B cell receptor activation
Awoniyi, L. O., Sustar, V., Hernandez-Perez, S., Vainio, M., Sarapulov, A. V., Petrov, P., Mattila, P. K.
10.1101/2020.09.29.318766 — Posted: 2020-10-01 — Discussion: 2023-02-28  Review Commons

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