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OpenSpliceAI: An efficient, modular implementation of SpliceAI enabling easy retraining on non-human species
Chao, K.-H., Mao, A., Liu, A., Salzberg, S. L., Pertea, M.
10.1101/2025.03.20.644351 — Posted: 2025-03-23 — Discussion: 2025-09-09  eLife
The increase in cell volume and nuclear number of the koji-fungus Aspergillus oryzae contributes to its high enzyme productivity
Itani, A., Motomura, H., Oda, K., Yamashita, H., Sakai, K., Kusumoto, K.-i., Shigeto, S., Ichikawa, T., Mubarak, H. M., Fukuma, T., Katayama, T., Maruyama, J.-i., Masuo, S., Takaya, N., Takeshita, N.
10.1101/2025.04.06.647446 — Posted: 2025-04-07 — Discussion: 2025-09-09  eLife
Quantitative RNA pseudouridine landscape reveals dynamic modification patterns and evolutionary conservation across bacterial species
Xu, L., Shen, S., Zhang, Y., Guo, Z., Lu, B., Huang, J., Li, R., Shen, Y., Zhang, L., Deng, X.
10.1101/2025.05.13.653745 — Posted: 2025-05-13 — Discussion: 2025-09-09  eLife
Tolerance to Lung Infection in TWIK2 K+ Efflux Mediated Macrophage Trained Immunity
Thompson, J., Li, Y., Song, Y., Kim, K.-W., Malik, A., Xu, J.
10.1101/2025.05.25.655979 — Posted: 2025-05-28 — Discussion: 2025-09-09  eLife
In silico design and validation of high-affinity RNA aptamers for SARS-CoV-2 comparable to neutralizing antibodies
Yang, Y., Qiao, L., Jiang, Y., Wang, Z., Zhang, D., Buratto, D., Huang, L., Zhou, R.
10.1101/2025.06.04.657802 — Posted: 2025-06-06 — Discussion: 2025-09-09  eLife
Depletion of extracellular asparagine impairs self-reactive T cells and ameliorates autoimmunity in a murine model of multiple sclerosis
Georgiev, P., Johnson, S., Kurmi, K., Hu, S.-H., Han, S., Patterson, D., Nguyen, T., Huang, L., Liang, D., Goldman, N., Conway, T., Creasey, H., Rowe, J., Haigis, M. C., Sharpe, A. H.
10.1101/2025.06.09.658561 — Posted: 2025-06-11 — Discussion: 2025-09-09  eLife
A tool to pulse-label yeast Nuclear Pore Complexes in imaging and biochemical experiments
Veldsink, A. C., Fischer, J. S., Hell, S., Weis, K., Veenhoff, L. M.
10.1101/2025.07.15.664992 — Posted: 2025-07-16 — Discussion: 2025-09-09  eLife
Associations Between Meteorological Factors and Influenza A/B Incidence in Subtropical China: A Six-Year Surveillance Study with Deep Learning Modelling for Influenza Early Warning
Xie, L., Zhang, M.-J., Tan, J.-L., Ling, Y.-X., Xue, Z.-Q., Huang, J.-J., Chen, J.-L., Ruan, Z.-F., Qian, J., Pan, H.-Y., Han, X., Xiong, S., Ling, L.-M., Jiang, X.-W.
10.1101/2025.07.13.25331478 — Posted: 2025-07-15 — Discussion: 2025-09-09  eLife
The metabolic cofactor Coenzyme A enhances alternative macrophage activation via MyD88-linked signaling
Jones, A. E., Rios, A., Ibrahimovic, N., Chavez, C., Bayley, N. A., Ball, A. B., Hsieh, W. Y., Sammarco, A., Bianchi, A. R., Cortez, A. A., Graeber, T. G., Hoffmann, A., Bensinger, S. J., Divakaruni, A. S.
10.1101/2024.03.28.587096 — Posted: 2024-03-31 — Discussion: 2025-09-08  Review Commons
Local Synthesis of Reticulon-1C Lessens the Outgrowth of Injured Axons by Controlling Spastin Activity
Luarte, A., Gallardo, J., Corvalan, D., Chakraborty, A., Gouveia-Roque, C., Bertin, F., Contreras, C., Ramirez, J. P., Weber, A., Acevedo, W., Zuschratter, W., Herrera, R., Wyneken, U., Paula Lima, A., Adasme, T., Figueroa, A., Gonzalez, C., Gonzalez-Billault, C., Hengst, U., Couve, A.
10.1101/2024.08.11.607514 — Posted: 2024-08-12 — Discussion: 2025-09-08  Review Commons

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