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117 Reviews — eLife — Systems Biology

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The conserved transcriptional program of metazoan male germ cells uncovers ancient origins of human infertility
Correia, R. B., Almeida, J. M., Wyrwoll, M. J., Julca, I., Sobral, D., Misra, C. S., Guilgur, L. G., Schuppe, H.-C., Silva, N., Prudêncio, P., Nóvoa, A., Leocádio, A. S., Bom, J., Mallo, M., Kliesch, S., Mutwil, M., Rocha, L. M., Tüttelmann, F., Becker, J. D., Navarro-Costa, P.
10.1101/2022.03.02.482557 — Posted: 2022-03-02 — Discussion: 2024-09-02  eLife
Systems analysis of miR-199a/b-5p and multiple miR-199a/b-5p targets during chondrogenesis
Patel, K., Barter, M. J., Soul, J., Proctor, C. J., Clark, I. M., Young, D., Shanley, D. P.
10.1101/2023.03.31.535081 — Posted: 2023-04-03 — Discussion: 2024-07-17  eLife
Interpreting roles of mutations associated with the emergence of S. aureus USA300 strains using transcriptional regulatory network reconstruction
Poudel, S., Hyun, J. C., Hefner, Y., Monk, J., Nizet, V., Palsson, B. O.
10.1101/2023.07.26.550757 — Posted: 2023-07-29 — Discussion: 2024-07-10  eLife
Self-inhibiting percolation and viral spreading in epithelial tissue
Xu, X., Nielsen, B. F., sneppen, k.
10.1101/2023.12.12.571279 — Posted: 2023-12-13 — Discussion: 2024-05-21  eLife
Agent-based model demonstrates the impact of nonlinear, complex interactions between cytokines on muscle regeneration
Haase, M., Comlekoglu, T., Petrucciani, A., Peirce, S. M., Blemker, S. S.
10.1101/2023.08.14.553247 — Posted: 2023-08-16 — Discussion: 2024-04-29  eLife
Heritable epigenetic changes are constrained by the dynamics of regulatory architectures
Jose, A. M.
10.1101/2023.06.07.544138 — Posted: 2023-06-09 — Discussion: 2024-04-08  eLife
A Logic-incorporated Gene Regulatory Network Deciphers Principles in Cell Fate Decisions
Xue, G., Zhang, X., Li, W., Zhang, L., Zhang, Z., Zhou, X., Zhang, D., Zhang, L., Li, Z.
10.1101/2023.04.21.537440 — Posted: 2023-04-21 — Discussion: 2024-03-25  eLife
Tools and methods for high-throughput single-cell imaging with the mother machine
Thiermann, R., Sandler, M., Ahir, G., Sauls, J. T., Schroeder, J. W., Brown, S. D., Le Treut, G., Si, F., Li, D., Wang, J., Jun, S.
10.1101/2023.03.27.534286 — Posted: 2023-03-29 — Discussion: 2024-03-11  eLife
Yeast cell responses and survival during periodic osmotic stress are controlled by glucose availability
Duveau, F. M., Cordier, C., Chiron, L., Le Bec, M., Pouzet, S., Seguin, J., Llamosi, A., Sorre, B., Di Meglio, J.-M., Hersen, P.
10.1101/2023.02.17.528926 — Posted: 2023-02-17 — Discussion: 2024-02-26  eLife
Pleiotropic effects of trisomy and pharmacologic modulation on structural, functional, molecular, and genetic systems in a Down syndrome mouse model
Llambrich, S., Tielemans, B., Saliën, E., Atzori, M., Wouters, K., Van Bulck, V., Platt, M., Vanherp, L., Gallego Fernandez, N., Grau de la Fuente, L., Poptani, H., Verlinden, L., Himmelreich, U., Croitor, A., Attanasio, C., Callaerts-Vegh, Z., Gsell, W., Martinez-Abadias, N., Vande Velde, G.
10.1101/2023.07.31.551282 — Posted: 2023-08-01 — Discussion: 2024-02-14  eLife

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