bioRxiv/medRxiv TRiP Review Activity

251 Reviews — All Partners — Systems Biology

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In silico identification of switching nodes in metabolic networks
Mairet, F.
10.1101/2023.05.17.541195 — Posted: 2023-05-20 — Discussion: 2024-09-27  Peer Community In
Large-scale analysis of the integration of enhancer-enhancer signals by promoters
Martinez-Ara, M., Comoglio, F., van Steensel, B.
10.1101/2023.08.11.552995 — Posted: 2023-08-14 — Discussion: 2024-09-11  eLife
The conserved transcriptional program of metazoan male germ cells uncovers ancient origins of human infertility
Correia, R. B., Almeida, J. M., Wyrwoll, M. J., Julca, I., Sobral, D., Misra, C. S., Guilgur, L. G., Schuppe, H.-C., Silva, N., Prudêncio, P., Nóvoa, A., Leocádio, A. S., Bom, J., Mallo, M., Kliesch, S., Mutwil, M., Rocha, L. M., Tüttelmann, F., Becker, J. D., Navarro-Costa, P.
10.1101/2022.03.02.482557 — Posted: 2022-03-02 — Discussion: 2024-09-02  eLife
Genome-wide conditional degron libraries for functional genomics
Gameiro, E., Juarez-Nunez, K. A., Fung, J. J., Shankar, S., Luke, B., Khmelinskii, A.
10.1101/2024.05.29.596381 — Posted: 2024-06-02 — Discussion: 2024-09-02  Review Commons
Unveiling Gene Perturbation Effects through Gene Regulatory Networks Inference from single-cell transcriptomic data
Corridori, C., Romeike, M., Nicoletti, G., Buecker, C., Suweis, S., Azaele, S., Martello, G.
10.1101/2024.05.10.593314 — Posted: 2024-05-10 — Discussion: 2024-08-16  Review Commons
A large-scale cancer-specific protein-DNA interaction network
Lu, Y., Berenson, A., Lane, R., Guelin, I., Li, Z., Chen, Y., Shah, S., Yin, M., Soto-Ugaldi, L. F., Fiszbein, A., Fuxman Bass, J. I.
10.1101/2024.01.24.577099 — Posted: 2024-01-29 — Discussion: 2024-07-30  EMBO Press
Systems analysis of miR-199a/b-5p and multiple miR-199a/b-5p targets during chondrogenesis
Patel, K., Barter, M. J., Soul, J., Proctor, C. J., Clark, I. M., Young, D., Shanley, D. P.
10.1101/2023.03.31.535081 — Posted: 2023-04-03 — Discussion: 2024-07-17  eLife
Sfp1 integrates TORC1 and PKA activity towards yeast ribosome biogenesis
Vuillemenot, L.-A., Milias-Argeits, A.
10.1101/2022.12.02.518855 — Posted: 2022-12-02 — Discussion: 2024-07-11  Review Commons
Interpreting roles of mutations associated with the emergence of S. aureus USA300 strains using transcriptional regulatory network reconstruction
Poudel, S., Hyun, J. C., Hefner, Y., Monk, J., Nizet, V., Palsson, B. O.
10.1101/2023.07.26.550757 — Posted: 2023-07-29 — Discussion: 2024-07-10  eLife
Emergence of Supercoiling-Mediated Regulatory Networks through Bacterial Chromosome Rearrangements
Grohens, T., Beslon, G., Meyer, S.
10.1101/2022.09.23.509185 — Posted: 2022-09-23 — Discussion: 2024-06-28  Peer Community In

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