bioRxiv/medRxiv TRiP Review Activity

93 Reviews — Gigabyte — All Subjects

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De novo transcriptome assembly and genome annotation of the fat-tailed dunnart (Sminthopsis crassicaudata)
Ibeh, N., Feigin, C. Y., Frankenberg, S. R., McCarthy, D. J., Pask, A. J., Gallego Romero, I.
10.1101/2023.11.16.567318 — Posted: 2023-11-17 — Discussion: 2024-05-13  Gigabyte
Molecular Property Diagnostic Suite for COVID-19 (MPDSCOVID-19): An open access disease specific drug discovery portal
Sastry, G. N., Priyadarsinee, L., Jamir, E., Nagamani, S., Mahanta, H. J., Kumar, N., John, L., Sarma, H., Kumar, A., Gaur, A. S., Sahoo, R., Vaikundamani, S., Murugan, N. A., Priyakumar, U. D., Raghava, G. P. S., Bharatam, P., Ramakrishnan, P., Subramanian, V., Sastry, G. M.
10.1101/2023.08.29.555437 — Posted: 2023-08-30 — Discussion: 2024-03-18  Gigabyte
An improved chromosome-level genome assembly of perennial ryegrass (Lolium perenne L.)
Chen, Y., Koelliker, R., Mascher, M., Copetti, D., Himmelbach, A., Stein, N., Studer, B.
10.1101/2023.12.05.570088 — Posted: 2023-12-05 — Discussion: 2024-03-18  Gigabyte
Citizen Science Data on Urban Forageable Plants: A Case Study in Brazil
Soares, F. M., Pires, L. F., Garcia, M. C., Coradin, L., Ghilardi-Lopes, N. P., Silva, R. R., Carvalho, A. M. d., Gavai, A., Bouzembrak, Y., Maculan, B. C. M. d. S., Koffler, S., Montedo, U. B., Drucker, D. P., Santiago, R., Carvalho, M. C. P. d., Lima, A. C. d. S., Gabriel, H. D. E., Franca, S. G. M. d., Almeida, K. R. d., Santos, B. J. d., Saraiva, A. M.
10.1101/2024.01.22.575882 — Posted: 2024-01-25 — Discussion: 2024-03-05  Gigabyte
Generating single-cell gene expression profiles for high-resolution spatial transcriptomics based on cell boundary images
Zhang, B., Li, M., Kang, Q., Deng, Z., Qin, H., Su, K., Feng, X., Chen, L., Liu, H., Fang, S., Zhang, Y., Li, Y., Brix, S., Xu, X.
10.1101/2023.12.25.573324 — Posted: 2023-12-26 — Discussion: 2024-02-26  Gigabyte
SAW: An efficient and accurate data analysis workflow for Stereo-seq spatial transcriptomics
Gong, C., Li, S., Wang, L., Zhao, F., Fang, S., Yuan, D., Zhao, Z., He, Q., Li, M., Liu, W., Li, Z., Xie, H., Liao, S., Chen, A., Zhang, Y., Li, Y., Xu, X.
10.1101/2023.08.20.554064 — Posted: 2023-08-21 — Discussion: 2024-02-26  Gigabyte
BatchEval Pipeline: Batch Effect Evaluation Workflow for Multiple Datasets Joint Analysis
Zhang, C., Kang, Q., Li, M., Xie, H., Fang, S., Xu, X.
10.1101/2023.10.08.561465 — Posted: 2023-10-10 — Discussion: 2024-02-26  Gigabyte
Species Composition and Distribution of Anopheles gambiae Complex Circulating in Kinshasa
Zanga, J., Metelo, E., Mvuama, N., Nsabatien, V. N., Mvudi, V., Banzulu, D., Mansiangi, O., Bamba, M., Basosila, N., Agossa, F., Wumba, R.
10.1101/2023.10.26.564181 — Posted: 2023-10-30 — Discussion: 2024-02-14  Gigabyte
Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
Wolf, M., Ferrette, B. L. S., Coimbra, R. T. F., de Jong, M., Nebenfuehr, M., Prochotta, D., Schoeneberg, Y., Zapf, K., Rosenbaum, J., Mc Intyre, H. A., Maier, J., de Souza, C. C. S., Gehlhaar, L. M., Werner, M. J., Oechler, H., Wittekind, M., Sonnewald, M., Nilsson, M. A., Janke, A., Winter, S.
10.1101/2023.12.12.571260 — Posted: 2023-12-13 — Discussion: 2024-02-14  Gigabyte
Nanopore Adaptive Sampling Enriches for Antimicrobial Resistance Genes in Microbial Communities
Wrenn, D. C., Drown, D. M.
10.1101/2023.06.27.546783 — Posted: 2023-06-30 — Discussion: 2023-12-25  Gigabyte

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