bioRxiv/medRxiv TRiP Review Activity

266 Reviews — All Partners — Systems Biology

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Deciphering microbial interactions in synthetic human gut microbiome communities
Venturelli, O. S., Carr, A. C., Fisher, G., Hsu, R. H., Lau, R., Bowen, B. P., Northen, T., Arkin, A. P.
10.1101/228395 — Posted: 2017-12-03 — Discussion: 2019-09-22  EMBO Press
From word models to executable models of signaling networks using automated assembly
Gyori, B. M., Bachman, J. A., Subramanian, K., Muhlich, J. L., Galescu, L., Sorger, P. K.
10.1101/119834 — Posted: 2017-03-23 — Discussion: 2019-09-22  EMBO Press
In Situ Genotyping Of A Pooled Strain Library After Characterizing Complex Phenotypes
Lawson, M. J., Camsund, D., Larsson, J., Baltekin, O., Fange, D., Elf, J.
10.1101/142729 — Posted: 2017-05-26 — Discussion: 2019-09-22  EMBO Press
Complex-centric proteome profiling by SEC-SWATH-MS
Heusel, M., Bludau, I., Rosenberger, G., Hafen, R., Frank, M., Banaei-Esfahani, A., Collins, B., Gstaiger, M., Aebersold, R.
10.1101/323683 — Posted: 2018-05-21 — Discussion: 2019-09-22  EMBO Press
Timing of gene expression in a cell-fate decision system
Aymoz, D., Sole, C., Pierre, J.-J., Schmitt, M., de Nadal, E., Posas, F., Pelet, S.
10.1101/197103 — Posted: 2017-10-02 — Discussion: 2019-09-22  EMBO Press
Distinct Cellular States Determine Calcium Signaling Response
Jason Yao, Roy Wollman
10.1101/059287 — Posted: 2016-06-16 — Discussion: 2019-09-22  EMBO Press
De novo Gene Signature Identification from Single-Cell RNA-Seq with Hierarchical Poisson Factorization
Levitin, H. M., Yuan, J., Cheng, Y. L., Ruiz, F. J. R., Bush, E. C., Bruce, J. N., Canoll, P., Iavarone, A., Lasorella, A., Blei, D. M., Sims, P. A.
10.1101/367003 — Posted: 2018-07-11 — Discussion: 2019-09-22  EMBO Press
MODELING SIGNALING-DEPENDENT PLURIPOTENT CELL STATES WITH BOOLEAN LOGIC CAN PREDICT CELL FATE TRANSITIONS
Yachie-Kinoshita, A., Onishi, K., Ostblom, J., Posfai, E., Rossant, J., Zandstra, P. W.
10.1101/115683 — Posted: 2017-03-10 — Discussion: 2019-09-22  EMBO Press
Expression variation and covariation impair analog and enable binary signaling control
Kovary, K. M., Taylor, B., Zhao, M. L., Teruel, M. N.
10.1101/244236 — Posted: 2018-01-08 — Discussion: 2019-09-22  EMBO Press
Assigning Function To Natural Allelic Variation Via Dynamic Modeling Of Gene Network Induction
Richard, M., Chuffart, F., Duplus-Bottin, H., Pouyet, F., Spichty, M., Fulcrand, E., Entrevan, M., Barthelaix, A., Springer, M., Jost, D., Yvert, G.
10.1101/140467 — Posted: 2017-05-20 — Discussion: 2019-09-22  EMBO Press

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