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SAW: An efficient and accurate data analysis workflow for Stereo-seq spatial transcriptomics
Gong, C., Li, S., Wang, L., Zhao, F., Fang, S., Yuan, D., Zhao, Z., He, Q., Li, M., Liu, W., Li, Z., Xie, H., Liao, S., Chen, A., Zhang, Y., Li, Y., Xu, X.
10.1101/2023.08.20.554064 — Posted: 2023-08-21 — Discussion: 2024-02-26  Gigabyte
c-Src induced vascular malformations require localised matrix degradation at focal adhesions
Essebier, P., Schimmel, L., Yordanov, T., Keyser, M., Yu, A., Noordstra, I., Hill, B., Yap, A. S., Stehbens, S. J., Lagendijk, A., Gordon, E.
10.1101/2023.09.15.557868 — Posted: 2023-09-15 — Discussion: 2024-02-26  Review Commons
The evolution of transposable elements in Brachypodium distachyon is governed by purifying selection, while neutral and adaptive processes play a minor role
Horvath, R., Minadakis, N., Bourgeois, Y. X. C., Roulin, A.
10.1101/2023.09.15.557873 — Posted: 2023-09-17 — Discussion: 2024-02-26  eLife
Developmental conversion of thymocyte-attracting cells into self-antigen-displaying cells in embryonic thymus medulla epithelium
Ohigashi, I., White, A., Yang, M.-T., Fujimori, S., Tanaka, Y., Jacques, A., Kiyonari, H., Matsushita, Y., Turan, S., Kelly, M. C., Anderson, G., Takahama, Y.
10.1101/2023.10.03.560657 — Posted: 2023-10-04 — Discussion: 2024-02-26  eLife
BatchEval Pipeline: Batch Effect Evaluation Workflow for Multiple Datasets Joint Analysis
Zhang, C., Kang, Q., Li, M., Xie, H., Fang, S., Xu, X.
10.1101/2023.10.08.561465 — Posted: 2023-10-10 — Discussion: 2024-02-26  Gigabyte
Unravelling the metastasis-preventing effect of miR-200c in vitro and in vivo
Koehler, B., Brieger, E., Brandstaetter, T., Hoerterer, E., Wilk, U., Poehmerer, J., Joetten, A., Paulitschke, P., Broedersz, C. P., Zahler, S., Raedler, J. O., Wagner, E., Roidl, A.
10.1101/2023.11.14.566527 — Posted: 2023-11-16 — Discussion: 2024-02-26  Review Commons
Linking root-associated fungal and bacterial functions to root economics
Wu, R., Zeng, X., McCormack, M. L., Fernandez, C. W., Yang, Y., Guo, H., Xi, M., Liu, Y., Qi, X., Liang, S., Juenger, T., Koide, R. T., Chen, W.
10.1101/2023.12.06.570504 — Posted: 2023-12-08 — Discussion: 2024-02-26  eLife
Large pan-cancer cell screen coupled to (phospho-) proteomics underscores high-dose vitamin C as a potent anti-cancer agent
Valles Marti, A., Böttger, F., Yau, E., Tejjani, K., Meijs, L., Sharma, S., Mumtaz, M., Le Large, T., Erozenci, A., Dekker, D., Schelfhorst, T., Medema, J. P., Bijnsdorp, I. V., Knol, J. C., Piersma, S. R., Pham, T. V., Giovannetti, E., Jimenez, C. R.
10.1101/2023.12.19.572293 — Posted: 2023-12-20 — Discussion: 2024-02-26  eLife
Generating single-cell gene expression profiles for high-resolution spatial transcriptomics based on cell boundary images
Zhang, B., Li, M., Kang, Q., Deng, Z., Qin, H., Su, K., Feng, X., Chen, L., Liu, H., Fang, S., Zhang, Y., Li, Y., Brix, S., Xu, X.
10.1101/2023.12.25.573324 — Posted: 2023-12-26 — Discussion: 2024-02-26  Gigabyte
Type I interferon modulates Langerhans cell ADAM17 to promote photosensitivity in lupus
Li, T. M., Veiga, K. R., Schwartz, N., Chinenov, Y., Oliver, D. J., Lora, J., Jabbari, A., Liu, Y., Shipman, W. D., Sandoval, M. J., Sollohub, I. F., Ambler, W. G., Rashighi, M., Krueger, J. G., Anandasabapathy, N., Blobel, C. P., Lu, T. T.
10.1101/2021.08.18.456792 — Posted: 2021-08-18 — Discussion: 2024-02-25  eLife

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