bioRxiv/medRxiv TRiP Review Activity

261 Reviews — All Partners — Systems Biology

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Mechanistic causes of constrained phenotypic variation revealed by synthetic gene regulatory networks
Schaerli, Y., Jimenez, A., Duarte, J. M., Mihajlovic, L., Renggli, J., Isalan, M., Sharpe, J., Wagner, A.
10.1101/184325 — Posted: 2017-09-04 — Discussion: 2019-09-22  EMBO Press
De novo Gene Signature Identification from Single-Cell RNA-Seq with Hierarchical Poisson Factorization
Levitin, H. M., Yuan, J., Cheng, Y. L., Ruiz, F. J. R., Bush, E. C., Bruce, J. N., Canoll, P., Iavarone, A., Lasorella, A., Blei, D. M., Sims, P. A.
10.1101/367003 — Posted: 2018-07-11 — Discussion: 2019-09-22  EMBO Press
A living vector field reveals constraints on galactose network induction in yeast
Sarah R. Stockwell, Scott A. Rifkin
10.1101/073817 — Posted: 2016-09-06 — Discussion: 2019-09-22  EMBO Press
Expression variation and covariation impair analog and enable binary signaling control
Kovary, K. M., Taylor, B., Zhao, M. L., Teruel, M. N.
10.1101/244236 — Posted: 2018-01-08 — Discussion: 2019-09-22  EMBO Press
A Map Of Genetic Interactions In Cancer Cells
Rauscher, B., Heigwer, F., Henkel, L., Hielscher, T., Boutros, M.
10.1101/120964 — Posted: 2017-03-27 — Discussion: 2019-09-22  EMBO Press
A deep proteome and transcriptome abundance atlas of 29 healthy human tissues
Wang, D., Eraslan, B., Wieland, T., Hallstrom, B. M., Hopf, T., Zolg, D. P., Zecha, J., Asplund, A., Li, L.-h., Meng, C., Frejno, M., Schmidt, T., Schnatbaum, K., Wilhelm, M., Ponten, F., Uhlen, M., Gagneur, J., Hahne, H., Kuster, B.
10.1101/357137 — Posted: 2018-06-27 — Discussion: 2019-09-22  EMBO Press
Mapping DNA damage-dependent genetic interactions in yeast via orgy mating and barcode fusion genetics
Diaz-Mejia, J. J., Mellor, J. C., Cote, A., Balint, A., Ho, B., Bansal, P., Shaeri, F., Gebbia, M., Weile, J., Verby, M., Karkhanina, A., Zhang, Y., Wong, C., Rich, J., Prendergast, D., Gupta, G., Ozturk, S., Durocher, D., Brown, G. W., Roth, F. P.
10.1101/181750 — Posted: 2017-08-31 — Discussion: 2019-09-22  EMBO Press
An Atlas of Human Kinase Regulation
David Ochoa, Mindaugas Jonikas, Robert T Lawrence, Bachir El Debs, Joel Selkrig, Athanasios Typas, Judit Villen, Silvia Santos, Pedro Beltrao
10.1101/067900 — Posted: 2016-08-04 — Discussion: 2019-09-22  EMBO Press
An integrative machine learning approach for prediction of toxicity-related drug safety
Lysenko, A., Sharma, A., Boroevich, K., Tsunoda, T.
10.1101/455667 — Posted: 2018-10-29 — Discussion: 2019-09-22  EMBO Press
Functional Compensation Between Hematopoietic Stem Cells In Vivo
Nguyen, L., Wang, Z., Chu, E., Eerdeng, J., Chowdhury, A., Lu, R.
10.1101/236398 — Posted: 2017-12-19 — Discussion: 2019-09-22  EMBO Press

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