bioRxiv/medRxiv TRiP Review Activity

259 Reviews — All Partners — Systems Biology

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Mammalian gene expression variability is explained by underlying cell state
Foreman, R., Wollman, R.
10.1101/626424 — Posted: 2019-05-03 — Discussion: 2020-06-04  EMBO Press
Impact of C-terminal amino acid composition on protein expression in bacteria
Weber, M., Burgos, R., Yus, E., Yang, J.-S., Lluch-Senar, M., Serrano, L.
10.1101/751305 — Posted: 2019-08-29 — Discussion: 2020-06-04  EMBO Press
Time-resolved genome-scale profiling reveals a causal expression network
Hackett, S. R., Baltz, E. A., Coram, M., Wranik, B. J., Kim, G., Baker, A., Fan, M., Hendrickson, D. G., Berndl, M., McIsaac, R. S.
10.1101/619577 — Posted: 2019-05-01 — Discussion: 2020-06-04  EMBO Press
Estrogen receptor alpha controls gene expression via translational offsetting
Lorent, J., Rebello, R. J., van Hoef, V., Lawrence, M. G., Szkop, K. J., Kusnadi, E., Samreen, B., Balanathan, P., Scharmann, K., Takizawa, I., Leidel, S. A., Risbridger, G. P., Topisirovic, I., Larsson, O., Furic, L.
10.1101/507574 — Posted: 2018-12-28 — Discussion: 2019-11-26  EMBO Press
Sufficiency analysis of estrogen responsive enhancers using synthetic activators
Ginley-Hidinger, M., Carleton, J. B., Rodriguez, A. C., Berrett, K. C., Gertz, J.
10.1101/479709 — Posted: 2018-11-26 — Discussion: 2019-11-26  EMBO Press
MODELING SIGNALING-DEPENDENT PLURIPOTENT CELL STATES WITH BOOLEAN LOGIC CAN PREDICT CELL FATE TRANSITIONS
Yachie-Kinoshita, A., Onishi, K., Ostblom, J., Posfai, E., Rossant, J., Zandstra, P. W.
10.1101/115683 — Posted: 2017-03-10 — Discussion: 2019-09-22  EMBO Press
Co-existing feedback loops generate tissue-specific circadian rhythms
Pett, J. P., Kondoff, M., Bordyugov, G., Kramer, A., Herzel, H.
10.1101/304451 — Posted: 2018-04-19 — Discussion: 2019-09-22  EMBO Press
Quantification and discovery of sequence determinants of protein per mRNA amount in 29 human tissues
Eraslan, B., Wang, D., Gusic, M., Prokisch, H., Hallstrom, B. M., Uhlen, M., Asplund, A., Ponten, F., Wieland, T., Hopf, T., Hahne, H., Kuster, B., Gagneur, J.
10.1101/353763 — Posted: 2018-06-27 — Discussion: 2019-09-22  EMBO Press
Assigning Function To Natural Allelic Variation Via Dynamic Modeling Of Gene Network Induction
Richard, M., Chuffart, F., Duplus-Bottin, H., Pouyet, F., Spichty, M., Fulcrand, E., Entrevan, M., Barthelaix, A., Springer, M., Jost, D., Yvert, G.
10.1101/140467 — Posted: 2017-05-20 — Discussion: 2019-09-22  EMBO Press
Non-canonical circadian oscillations in Drosophila S2 cells drive gene-expression cycles coupled to metabolic oscillations
Rey, G., Milev, N. B., Valekunja, U. K., Ch, R., Ray, S., Silva Dos Santos, M., Nagy, A. D., Antrobus, R., MacRae, J. I., Reddy, A. B.
10.1101/191338 — Posted: 2017-09-20 — Discussion: 2019-09-22  EMBO Press

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