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Single Cell RNA Sequencing Provides Clues for the Developmental Genetic Basis of Syngnathidae's Evolutionary Adaptations
Healey, H. M., Penn, H. B., Small, C. M., Bassham, S., Goyal, V., Woods, M. A., Cresko, W. A.
10.1101/2024.04.08.588518 — Posted: 2024-04-09 — Discussion: 2024-11-25  eLife
Single-Cell and Spatial Transcriptomic Analyses Reveals the Dynamic Transcript Profiles of Myocardial Lymphangiogenesis post Myocardial Infarction
Jiaqi, H., Zhang, D., Song, H., Liu, Z., Liu, D., Zhang, X., Zhao, X., Zhang, Y., Liu, J., Xu, J., Yan, C., Han, Y.
10.1101/2024.06.10.598235 — Posted: 2024-06-11 — Discussion: 2024-11-25  eLife
Temporal dynamics analysis reveals that concurrent working memory load eliminates the Stroop effect through disrupting stimulus-response mapping
Li, Y., Lin, Y., Li, Q., Chen, Y., Li, Z., Chen, A.
10.1101/2024.07.17.603992 — Posted: 2024-07-19 — Discussion: 2024-11-25  eLife
Dopamine activity encodes the changing valence of the same stimulus in conditioned taste aversion paradigms
Loh, M., Hurh, S., Bazzino, P., Donka, R. M., Keinath, A. T., Roitman, J., Roitman, M. F.
10.1101/2024.09.30.615853 — Posted: 2024-10-01 — Discussion: 2024-11-25  eLife
StereoSiTE: A framework to spatially and quantitatively profile the cellular neighborhood organized iTME
Liu, X., Qu, C., Liu, C., Zhu, N., Huang, H., Teng, F., Huang, C., Luo, B., Liu, X., Xu, Y., Xie, M., Xi, F., Li, M., Wu, L., Li, Y., Chen, A., Xu, X., Liao, S., Zhang, J.
10.1101/2022.12.31.522366 — Posted: 2022-12-31 — Discussion: 2024-11-23  GigaScience
A data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence (MISIP)
Simpson, A. M. R., Wood Charlson, E. M., Smith, M., Beilsmith, K., Koch, B., Walls, R. L., Wilhelm, R. C.
10.1101/2023.07.13.548835 — Posted: 2023-07-17 — Discussion: 2024-11-23  GigaScience
An Unsupervised Contrastive Learning Model for Data Integration of Spatially Resolved Transcriptomics
Zhang, C., Liu, L., Zhang, Y., Li, M., Fang, S., Kang, Q., Chen, A., Xu, X., Zhang, Y., Li, Y.
10.1101/2023.08.08.552402 — Posted: 2023-08-12 — Discussion: 2024-11-23  GigaScience
CoCoPyE: feature engineering for learning and prediction of genome quality indices
Birth, N., Leppich, N., Schirmacher, J., Andreae, N., Steinkamp, R., Blanke, M., Meinicke, P.
10.1101/2024.02.07.579156 — Posted: 2024-02-10 — Discussion: 2024-11-23  GigaScience
Discovering genotype-phenotype relationships with machine learning and the Visual Physiology Opsin Database (VPOD)
Frazer, S. A., Baghbanzadeh, M., Rahnavard, A., Crandall, K. A., Oakley, T. H.
10.1101/2024.02.12.579993 — Posted: 2024-02-14 — Discussion: 2024-11-23  GigaScience
Modeling and Simulation of Rat Non-Barrel Somatosensory Cortex. Part I: Modeling Anatomy
Reimann, M. W., Bolanos Puchet, S., Egas Santander, D., Courcol, J.-D., Arnaudon, A., Coste, B., Delemontex, T., Devresse, A., Dictus, H., Dietz, A., Ecker, A., Favreau, C., Ficarelli, G., Gevaert, M., Hernando, J. B., Herttuainen, J., Isbister, J. B., Kanari, L., Keller, D., King, J. G., Kumbhar, P., Lapere, S., Lazovskis, J., Lu, H., Ninin, N., Pereira, F., Planas, J., Pokorny, C., Riquelme, J. L., Romani, A., Shi, Y., Smith, J. P., Sood, V., Srivastava, M., Van Geit, W., Vanherpe, L., Wolf, M., Levi, R., Hess, K., Schürmann, F., Muller, E. B., Ramaswamy, S., Markram, H.
10.1101/2022.08.11.503144 — Posted: 2022-08-15 — Discussion: 2024-11-22  eLife

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