bioRxiv/medRxiv TRiP Review Activity

266 Reviews — All Partners — Systems Biology

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Exploring amino acid functions in a deep mutational landscape
Dunham, A., Beltrao, P.
10.1101/2020.05.26.116756 — Posted: 2020-05-27 — Discussion: 2021-10-30  EMBO Press
Exploring functional protein covariation across single cells using nPOP
Leduc, A., Huffman, R. G., Cantlon, J., Khan, S., Slavov, N.
10.1101/2021.04.24.441211 — Posted: 2022-03-30 — Discussion: 2021-10-26  ASAPbio crowd review
High-resolution mapping of the period landscape reveals polymorphism in cell cycle frequency tuning
Li, Z., Wang, S., Sun, M., Jin, M., Khain, D., Yang, Q.
10.1101/2021.05.10.442602 — Posted: 2021-05-10 — Discussion: 2021-10-18  eLife
Evaluating the Simple Arrhenius Equation for the Temperature Dependence of Complex Developmental Processes
Crapse, J., Pappireddi, N., Gupta, M., Shvartsman, S. Y., Wieschaus, E., Wuhr, M.
10.1101/2020.07.17.208777 — Posted: 2020-07-18 — Discussion: 2021-09-30  EMBO Press
Protein allocation and utilization in the versatile chemolithoautotroph Cupriavidus necator
Jahn, M., Crang, N., Janasch, M., Hober, A., Forsström, B., Kimler, K., Mattausch, A., Chen, Q., Asplund-Samuelsson, J., Hudson, E. P.
10.1101/2021.03.21.436304 — Posted: 2021-03-22 — Discussion: 2021-09-20  eLife
Monocyte-derived transcriptome signature indicates antibody-dependent cellular 1 phagocytosis as the primary mechanism of vaccine-induced protection against HIV-1
Shangguan, S., Ehrenberg, P. K., Geretz, A., Yum, L., Kundu, G., May, K., Fourati, S., Nganou-Makamdop, k., Williams, L. D., Sawant, S., Lewitus, E., Pitisuttithum, P., Nitayaphan, S., Chariyalertsak, S., Rerks-Ngarm, S., Rolland, M., Douek, D. C., Gilbert, P., Tomaras, G. D., Michael, N. L., Vasan, S., Thomas, R.
10.1101/2021.05.12.443737 — Posted: 2021-05-15 — Discussion: 2021-09-06  eLife
Tunable phenotypic variability through an autoregulatory alternative sigma factor circuit
Schwall, C. P., Loman, T., Martins, B. M. C., Cortijo, S., Villava, C., Kusmartsev, V., Livesey, T., Saez, T., Locke, J. C. W.
10.1101/2020.06.18.158790 — Posted: 2020-06-18 — Discussion: 2021-08-13  EMBO Press
Identification of Covalent Modifications Regulating Immune Signaling Complex Composition and Phenotype
Frauenstein, A., Ebner, S., Sinha, A., Kshiti, P., Swatek, K., Hornburg, D., Mann, M., Meissner, F.
10.1101/2020.11.16.384750 — Posted: 2020-11-17 — Discussion: 2021-08-13  EMBO Press
TNF stimulation primarily modulates transcriptional burst size of NF-κB-regulated genes
Bass, V. L., Wong, V. C., Bullock, M. E., Gaudet, S., Miller-Jensen, K.
10.1101/2020.11.16.384297 — Posted: 2020-11-17 — Discussion: 2021-08-13  EMBO Press
Single-cell transcriptomics reveals immune response of intestinal cell types to viral infection
Triana, S., Stanifer, M. L., Shahraz, M., Mukenhirn, M., Kee, C., Ordonez Rueda, D., Paulsen, M., Benes, V., Boulant, S., Alexandrov, T.
10.1101/2020.08.19.255893 — Posted: 2020-08-19 — Discussion: 2021-08-13  EMBO Press

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