bioRxiv/medRxiv TRiP Review Activity

266 Reviews — All Partners — Systems Biology

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Missense variant interaction scanning reveals a critical role of the FERM-F3 domain for tumor suppressor protein NF2 conformation and function
Moesslacher, C. S., Woodsmith, J., Auernig, E., Feichtner, A., Jany-Luig, E., Jehle, S., Worseck, J. M., Stefan, E., Stelzl, U.
10.1101/2022.12.11.519953 — Posted: 2022-12-11 — Discussion: 2023-06-28  EMBO Press
A label-free method to track individuals and lineages of budding cells
Pietsch, J. M. J., Munoz, A. F., Adjavon, D.-Y. A., Farquhar, I., Clark, I. B., Swain, P. S.
10.1101/2022.05.11.491488 — Posted: 2022-05-12 — Discussion: 2023-06-09  eLife
Systems-level transcriptional regulation of Caenorhabditis elegans metabolism
Walhout, A. J., Nanda, S., Jacques, M.-A., Wang, W., Myers, C. L., Yilmaz, S.
10.1101/2022.11.08.515576 — Posted: 2022-11-09 — Discussion: 2023-06-02  EMBO Press
Automated assembly of molecular mechanisms at scale from text mining and curated databases
Bachman, J. A., Gyori, B. M., Sorger, P. K.
10.1101/2022.08.30.505688 — Posted: 2022-08-31 — Discussion: 2023-05-24  EMBO Press
Combined measurements of proteome and cell turnover reveal the influences of tissue context and pathological aging on protein and organelle lifetimes
Hasper, J., Welle, K. A., Hryhorenko, J., Ghaemmaghami, S., Buchwalter, A.
10.1101/2022.04.24.488979 — Posted: 2022-04-24 — Discussion: 2023-04-20  EMBO Press
A Multiscale Protein Abundance Structured Population Kinetic Model Systematically Explores the Design Space of Constitutive and Inducible CAR-T cells
Das, J., Rajakaruna, H., Desai, M.
10.1101/2023.01.09.523295 — Posted: 2023-01-09 — Discussion: 2023-04-20  Review Commons
Analysis of context-specific KRAS-effectors (sub)complexes in Caco-2 cells
Kiel, C., Ternet, C., Catozzi, S., Junk, P., Oliviero, G., Sevrin, T., Wynne, K.
10.1101/2022.08.15.503960 — Posted: 2022-08-15 — Discussion: 2023-04-11  EMBO Press
Predictive nonlinear modeling of malignant myelopoiesis and tyrosine kinase inhibitor therapy
Rodriguez, J. D., Iniguez, A., Jena, N., Tata, P., Liu, J., Lander, A. D., Lowengrub, J., Van Etten, R.
10.1101/2022.10.11.511822 — Posted: 2022-10-14 — Discussion: 2023-03-18  eLife
Mechanistic model of MAPK signaling reveals how allostery and rewiring contribute to drug resistance
Froehlich, F., Gerosa, L., Muhlich, J. L., Sorger, P. K.
10.1101/2022.02.17.480899 — Posted: 2022-02-18 — Discussion: 2023-02-17  EMBO Press
An unbiased pathway analysis (UPA) designed for multi-omics inference of cell signaling pathways
Vaparanta, K., Merilahti, J. A. M., Ojala, V. K., Elenius, K.
10.1101/2022.02.05.479228 — Posted: 2022-02-06 — Discussion: 2023-02-16  eLife

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