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CODARFE: Unlocking the prediction of continuous environmental variables based on microbiome
Barbosa, M. C., da Silva, J. F. M., Alves, L. C., Finn, R. D., Paschoal, A. R.
10.1101/2024.07.18.604052 — Posted: 2024-07-19 — Discussion: 2025-07-08  GigaScience
Chromosome-level reference genome for the medically important Arabian horned viper (Cerastes gasperettii)
Mochales Riano, G., Hirst, S. R., Talavera, A., Burriel-Carranza, B., Pagone, V., Estarellas, M., Busschau, T., Boissinot, S., Hogan, M. P., Tena-Garces, J., Pla, D., Calvete, J. J., Els, J., Margres, M. J., Carranza, S.
10.1101/2024.07.29.605543 — Posted: 2024-07-29 — Discussion: 2025-07-08  GigaScience
Chromosome-level genome assembly and methylome profile enables insights for the conservation of endangered loggerhead sea turtles
Yen, E. C., Gilbert, J. D., Balard, A., Taxonera, A., Fairweather, K., Ford, H. L., Thorburn, D.-M. J., Rossiter, S. J., Martin-Duran, J. M., Eizaguirre, C.
10.1101/2024.08.28.610089 — Posted: 2024-08-28 — Discussion: 2025-07-08  GigaScience
Long-term live imaging, cell identification and cell tracking in regenerating crustacean legs
Cevrim, C., Laplace-Builhe, B., Sugawara, K., Rusciano, M. L., Labert, N., Brocard, J., Almazan, A., Averof, M.
10.1101/2024.09.11.612529 — Posted: 2024-09-12 — Discussion: 2025-07-08  eLife
The FIP 1.0 Data Set: Highly Resolved Annotated Image Time Series of 4,000 Wheat Plots Grown in Six Years
Roth, L., Boss, M., Kirchgessner, N., Aasen, H., Aguirre-Cuellar, B. P., Akiina, P. P. A., Anderegg, J., Gajardo Castillo, J., Chen, X., Corrado, S., Cybulski, K., Keller, B., Kortstee, S. G., Kronenberg, L., Liebisch, F., Nousi, P., Oppliger, C., Perich, G., Pfeifer, J., Yu, K., Storni, N., Tschurr, F., Volpi, M., Treier, S., Zellweger, H., Zumsteg, O., Hund, A., Walter, A.
10.1101/2024.10.04.616624 — Posted: 2024-10-05 — Discussion: 2025-07-08  GigaScience
CellBinDB: A Large-Scale Multimodal Annotated Dataset for Cell Segmentation with Benchmarking of Universal Models
Shi, C., Fan, J., Deng, Z., Liu, H., Kang, Q., Li, Y., Guo, J., Wang, J., Gong, J., Liao, S., Chen, A., Zhang, Y., Li, M.
10.1101/2024.11.20.619750 — Posted: 2024-11-21 — Discussion: 2025-07-08  GigaScience
Atomistic Simulation of Voltage Activation of a Truncated BK Channel
Jia, Z., Chen, J.
10.1101/2025.01.08.631907 — Posted: 2025-01-13 — Discussion: 2025-07-08  eLife
The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments
Li, T., Alvarez, M., Liu, C., Abuhanna, K., Sun, Y., Ernst, J., Plath, K., Balliu, B., Luo, C., Zaitlen, N.
10.1101/2025.02.06.636969 — Posted: 2025-02-08 — Discussion: 2025-07-08  eLife
Extraction of biological terms using large language models enhances the usability of metadata in the BioSample database
Ikeda, S., Zou, Z., Bono, H., Moriya, Y., Kawashima, S., Katayama, T., Oki, S., Ohta, T.
10.1101/2025.02.17.638570 — Posted: 2025-02-22 — Discussion: 2025-07-08  GigaScience
CHROMAS: A Computational Pipeline to Track Chromatophores and Analyze their Dynamics
Ukrow, J., Renard, M. D. M., Moghimi, M., Laurent, G.
10.1101/2025.03.03.641160 — Posted: 2025-03-07 — Discussion: 2025-07-08  eLife

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