bioRxiv/medRxiv TRiP Review Activity

110 Reviews — eLife — Systems Biology

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TrueProbes: Quantitative Single-Molecule RNA-FISH Probe Design Improves RNA Detection
Hughes, J. J., Kesler, B. K., Adams, J. E., Hospelhorn, B. G., Neuert, G.
10.1101/2025.08.14.670355 — Posted: 2025-08-19 — Discussion: 2025-10-09  eLife
Tunable ligand discrimination via kinetic sorting
Dixit, P. D., Goetz, A., Madsen, R. R.
10.1101/2024.10.01.615884 — Posted: 2024-10-02 — Discussion: 2025-10-03  eLife
Regulation of Transcriptional Bursting and Spatial Patterning in Early Drosophila Embryo Development
Nieto, C., Vahdat, Z., Lim, B., Singh, A.
10.1101/2025.05.02.651973 — Posted: 2025-05-08 — Discussion: 2025-09-23  eLife
Cell type-specific network analysis in Diversity Outbred mice identifies genes potentially responsible for human bone mineral density GWAS associations
Dillard, L. J., Calabrese, G. M., Mesner, L. D., Farber, C. R.
10.1101/2024.05.20.594981 — Posted: 2024-05-21 — Discussion: 2025-09-02  eLife
Deep learning linking mechanistic models to single-cell transcriptomics data reveals transcriptional bursting in response to DNA damage
Huang, Z., Luo, S., Wang, Z., Zhang, Z., Jiang, B., Nie, Q., Zhang, J.
10.1101/2024.07.10.602845 — Posted: 2024-07-12 — Discussion: 2025-08-21  eLife
Exploiting fluctuations in gene expression to detect causal interactions between genes
Joly-Smith, E., Talpur, M. M., Allard, P., Papazotos, F., Potvin-Trottier, L., Hilfinger, A.
10.1101/2023.09.01.555799 — Posted: 2023-09-04 — Discussion: 2025-08-13  eLife
The zoo of the gene networks capable of pattern formation by extracellular signaling
Anhon, K. M., Ciudad, I. S.
10.1101/2025.05.06.652477 — Posted: 2025-05-07 — Discussion: 2025-08-06  eLife
Single-mRNA imaging and modeling reveal coupled translation initiation and elongation rates
Lamberti, I., Chao, J., Gobet, C., Naef, F.
10.1101/2025.04.30.651446 — Posted: 2025-05-05 — Discussion: 2025-08-01  eLife
Ribosome demand links transcriptional bursts to protein expression noise
Pal, S., Ray, U., Dhar, R.
10.1101/2023.10.19.563206 — Posted: 2023-10-23 — Discussion: 2025-07-11  eLife
The Product neutrality function defining genetic interactions emerges from mechanistic models of cell growth
Fuentes Valenzuela, L., Francois, P., Skotheim, J. M.
10.1101/2024.11.29.626097 — Posted: 2024-12-04 — Discussion: 2025-07-04  eLife

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