Channel: Brown University

This collection includes bioRxiv and medRxiv papers from authors at Brown University.

1530 Articles

Computational Pan-Genomics: Status, Promises and Challenges

Tobias Marschall, Manja Marz, Thomas Abeel, Louis Dijkstra, Bas E Dutilh, Ali Ghaffaari, Paul Kersey, Wigard Kloosterman, Veli Makinen, Adam Novak, Benedict Paten, David Porubsky, Eric RIVALS, Can Alkan, Jasmijn Baaijens, Paul I. W. de Bakker, Valentina Boeva, Raoul J.P. Bonnal, Francesca Chiaromonte, Rayan Chikhi, Francesca D. Ciccarelli, Robin Cijvat, Erwin Datema, Cornelia M. Van Duijn, Evan E. Eichler, Corinna Ernst, Eleazar Eskin, Erik Garrison, Mohammed El-Kebir, Gunnar W. Klau, Jan O Korbel, Eric-Wubbo Lameijer, Ben Langmead, Marcel Martin, Paul Medvedev, John C. Mu, Pieter Neerincx, Klaasjan Ouwens, Pierre Peterlongo, Pisan

10.1101/043430 — Posted: 2016-08-25

Opponent surrounds explain diversity of contextual phenomena across visual modalities

David A. Mely, Thomas Serre

10.1101/070821 — Posted: 2016-08-22

pong: fast analysis and visualization of latent clusters in population genetic data

Aaron A Behr, Katherine Z Liu, Gracie Liu-Fang, Priyanka Nakka, Sohini Ramachandran

10.1101/031815 — Posted: 2016-05-18

Membrane state diagrams make electrophysiological models simple

Robert Law, Stephanie R Jones

10.1101/051839 — Posted: 2016-05-05

Novel Covariance-Based Neutrality Test of Time-Series Data Reveals Asymmetries in Ecological and Economic Systems

Alex Washburne, Daniel Lacker, Josh Burby

10.1101/044495 — Posted: 2016-03-18

Drosophila CLAMP is an essential protein with sex-specific roles in males and females

Jennifer A. Urban, Caroline A. Doherty, William T. Jordan, Jacob E. Bliss, Jessica Feng, Marcela M. Soruco, Leila E. Reider, Erica N. Larschan

10.1101/042820 — Posted: 2016-03-08

Measuring epistasis in fitness landscapes: the correlation of fitness effects of mutations

Luca Ferretti, Benjamin Schmiegelt, Daniel Weinreich, Atsushi Yamauchi, Yutaka Kobayashi, Fumio Tajima, Guillaume Achaz

10.1101/042010 — Posted: 2016-03-01

Information-dependent Enrichment Analysis Reveals Time-dependent Transcriptional Regulation of the Estrogen Pathway of Toxicity

Salil N. Pendse, Alexandra Maertens, Michael Rosenberg, Dipanwita Roy, Rick A. Fasani, Marguerite M. Vantangoli, Samantha J. Madnick, Kim Boekelheide, Albert J. Fornace, James D. Yager, Thomas Hartung, Melvin E. Andersen, Patrick D. McMullen

10.1101/038570 — Posted: 2016-02-04

Reference-free deconvolution of DNA methylation data and mediation by cell composition effects

Eugene Andres Houseman, Molly L Kile, David C Christiani, Tan A Ince, Karl T Kelsey, Carmen J Marsit

10.1101/037671 — Posted: 2016-01-23

Quantifying the unobserved protein-coding variants in human populations provides a roadmap for large-scale sequencing projects

James Zou, Gregory Valiant, Paul Valiant, Konrad Karczewski, Siu On Chan, Kaitlin Samocha, Monkol Lek, Exome Aggregation Consortium, Shamil Sunyaev, Mark Daly, Daniel MacArthur

10.1101/030841 — Posted: 2015-11-07

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