Channel: Iowa State University

This collection includes bioRxiv and medRxiv papers from authors at Iowa State University.

699 Articles

Double triage to identify poorly annotated genes in Maize: The missing link in community curation

Tello-Ruiz, M. K., Marco, C. F., Hsu, F.-M., Khangura, R. S., Qiao, P., Sapkota, S., Stitzer, M. C., Wasikowski, R., Wu, H., Zhan, J., Chougule, K., Barone, L. C., Ghiban, C., Muna, D., Olson, A. C., Wang, L. C., Ware, D., Micklos, D. A.

10.1101/654848 — Posted: 2019-06-05

Benchmarking Transposable Element Annotation Methods for Creation of a Streamlined, Comprehensive Pipeline

Ou, S., Su, W., Liao, Y., Chougule, K., Ware, D., Peterson, T., Jiang, N., Hirsch, C. N., Hufford, M. B.

10.1101/657890 — Posted: 2019-06-03

Impaired peroxisomal import in Drosophila hepatocyte-like cells induces cardiac dysfunction through the pro-inflammatory cytokine Upd3

Huang, K., Miao, T., Chang, K., Kang, P., Jiang, Q., Simmonds, A. J., Di Cara, F., Bai, H.

10.1101/659128 — Posted: 2019-06-03

Hyppo-X: A Scalable Exploratory Framework for Analyzing Complex Phenomics Data

Kamruzzaman, M., Kalyanaraman, A., Krishnamoorthy, B., Hey, S., Schnable, P. S.

10.1101/159954 — Posted: 2019-06-02

Pervasive off-target and double-stranded DNA nicking by CRISPR-Cas12a

Murugan, K., Seetharam, A., Severin, A. J., Sashital, D. G.

10.1101/657791 — Posted: 2019-06-02

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Zhou, N., Jiang, Y., Bergquist, T. R., Lee, A. J., Kacsoh, B. Z., Crocker, A. W., Lewis, K. A., Georghiou, G., Nguyen, H. N., Hamid, M. N., Davis, L., The Critical Assessment of Function Annotation, , Rost, B., Brenner, S. E., Orengo, C. A., Jeffery, C. J., Bosco, G. D., Hogan, D. A., Martin, M. J., O'Donovan, C., Mooney, S. D., Greene, C. S., Radivojac, P., Friedberg, I.

10.1101/653105 — Posted: 2019-05-29

GeneWeld: a method for efficient targeted integration directed by short homology

Wierson, W. A., Welker, J. M., Almeida, M. P., Mann, C. M., Webster, D. A., Weiss, T. J., Torrie, M. E., Vollbrecht, M. K., Lan, M., McKeighan, K. C., Levey, J., Ming, Z., Wehmeier, A., Mikelson, C. S., Haltom, J. A., Kwan, K. M., Chien, C.-B., Balciunas, D., Ekker, S. C., Clark, K. J., Webber, B. R., Moriarity, B., Solin, S. L., Carlson, D. F., Dobbs, D. L., McGrail, M., Essner, J. J.

10.1101/431627 — Posted: 2019-05-25

Genome-wide association study in two cohorts from a multi-generational mouse advanced intercross line highlights the difficulty of replication

Zhou, X., St. Pierre, C. L., Gonzales, N. M., Cheng, R., Chitre, A. S., Sokoloff, G., Palmer, A. A.

10.1101/387613 — Posted: 2019-05-21

Robinson-Foulds Reticulation Networks

Markin, A., Anderson, T. K., Vadali, V. S., Eulenstein, O.

10.1101/642793 — Posted: 2019-05-20

Strategies for building computing skills to support microbiome analysis: a five-year perspective from the EDAMAME workshop

Shade, A., Dunivin, T. K., Choi, J., Teal, T., Howe, A. C.

10.1101/631267 — Posted: 2019-05-09

Collection RSS | JSON

The feeds linked above output metadata for the 100 most recent papers in the collection.To access the metadata for the entire collection in JSON or XML, visit the collection API.