Channel: Oregon Health & Science University

This collection includes bioRxiv and medRxiv papers from authors at Oregon Health & Science University.

1219 Articles

Young Hwan Chang, Claire Tomlin

10.1101/071217 — Posted: 2016-09-26

Construction of thousands of single cell genome sequencing libraries using combinatorial indexing

Sarah A Vitak, Kristof A Torkenczy, Jimi L Rosenkrantz, Andrew J Fields, Lena Christiansen, Melissa H Wong, Lucia Carbone, Frank J Steemers, Andrew Adey

10.1101/065482 — Posted: 2016-07-23

Architecture of fully occupied GluA2 AMPA receptor - TARP complex elucidated by single particle cryo-electron microscopy

Yan Zhao, Shanshuang Chen, Craig Yoshioka, Isabelle Baconguis, Eric Gouaux

10.1101/060046 — Posted: 2016-06-21

Navigating the phenotype frontier: The Monarch Initiative

Julie McMurry, Sebastian Kohler, James Balhoff, Charles Borromeo, Matthew Brush, Seth Carbon, Tom Conlin, Nathan Dunn, Mark Engelstad, Erin Foster, Jean-Philippe Gourdine, Julius Jacobsen, Daniel Keith, Bryan Laraway, Suzanna Lewis, Jeremy Nguyen Xuan, Kent Shefchek, Nicole Vasilevsky, Zhou Yuan, Nicole Washington, Harry Hochheiser, Christopher Mungall, Tudor Groza, Damian Smedley, Peter Robinson, Melissa Haendel

10.1101/059204 — Posted: 2016-06-15

Whole-genome characterization in pedigreed non-human primates using Genotyping-By-Sequencing and imputation.

Ben N Bimber, Michael J Raboin, John Letaw, Kimberly Nevonen, Jennifer E Spindel, Susan McCouch, Rita Cervera-Juanes, Eliot Spindel, Lucia Carbone, Betsy Ferguson, Amanda Vinson

10.1101/043240 — Posted: 2016-03-12

Context-specificity in causal signaling networks revealed by phosphoprotein profiling

Steven M. Hill, Nicole K. Nesser, Katie Johnson-Camacho, Mara Jeffress, Aimee Johnson, Chris Boniface, Simon E.F. Spencer, Yiling Lu, Laura M. Heiser, Yancey Lawrence, Nupur T. Pande, James E. Korkola, Joe W. Gray, Gordon B. Mills, Sach Mukherjee, Paul T. Spellman

10.1101/039636 — Posted: 2016-02-15

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

Tyler S Alioto, Sophia Derdak, Timothy A Beck, Paul C Boutros, Lawrence Bower, Ivo Buchhalter, Matthew D Eldridge, Nicholas J Harding, Lawrence Edward Heisler, Eivind Hovig, David T W Jones, Andrew G Lynch, Sigve Nakken, Paolo Ribeca, Anne-Sophie Sertier, Jared T Simpson, Paul Spellman, Patrick Tarpey, Laurie Tonon, Daniel Vodák, Takafumi N Yamaguchi, Sergi Beltran Agullo, Marc Dabad, Robert E Denroche, Philip Ginsbach, Simon C Heath, Emanuele Raineri, Charlotte L Anderson, Benedikt Brors, Ruben Drews, Roland Eils, Akihiro Fujimoto, Francesc Castro Giner, Minghui He, Pablo Hennings-Yeomans, Barbara Hutter, Natalie Jäger, Rolf Kab

10.1101/012997 — Posted: 2014-12-24

An Approximate Bayesian Computation Approach to Examining the Phylogenetic Relationships among the Four Gibbon Genera using Whole Genome Sequence Data

Krishna Veeramah, August E Woerner, Laurel Johnstone, Ivo Gut, Marta Gut, Tomas Marques-Bonet, Lucia Carbone, Jeff D Wall, Michael F Hammer

10.1101/009498 — Posted: 2014-09-22

Disentangling Multidimensional Spatio-Temporal Data into their Common and Aberrant Responses

Young Hwan Chang, Jim Korkola, Dhara N. Amin, Mark M. Moasser, Jose M. Carmena, Joe W. Gray, Claire J. Tomlin

10.1101/004259 — Posted: 2014-04-28

Exact Reconstruction of Gene Regulatory Networks using Compressive Sensing

Young Hwan Chang, Joe W. Gray, Claire J. Tomlin

10.1101/004242 — Posted: 2014-04-20

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