Channel: Oregon Health & Science University

This collection includes bioRxiv and medRxiv papers from authors at Oregon Health & Science University.

1165 Articles

Whole-genome characterization in pedigreed non-human primates using Genotyping-By-Sequencing and imputation.

Ben N Bimber, Michael J Raboin, John Letaw, Kimberly Nevonen, Jennifer E Spindel, Susan McCouch, Rita Cervera-Juanes, Eliot Spindel, Lucia Carbone, Betsy Ferguson, Amanda Vinson

10.1101/043240 — Posted: 2016-03-12

Context-specificity in causal signaling networks revealed by phosphoprotein profiling

Steven M. Hill, Nicole K. Nesser, Katie Johnson-Camacho, Mara Jeffress, Aimee Johnson, Chris Boniface, Simon E.F. Spencer, Yiling Lu, Laura M. Heiser, Yancey Lawrence, Nupur T. Pande, James E. Korkola, Joe W. Gray, Gordon B. Mills, Sach Mukherjee, Paul T. Spellman

10.1101/039636 — Posted: 2016-02-15

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

Tyler S Alioto, Sophia Derdak, Timothy A Beck, Paul C Boutros, Lawrence Bower, Ivo Buchhalter, Matthew D Eldridge, Nicholas J Harding, Lawrence Edward Heisler, Eivind Hovig, David T W Jones, Andrew G Lynch, Sigve Nakken, Paolo Ribeca, Anne-Sophie Sertier, Jared T Simpson, Paul Spellman, Patrick Tarpey, Laurie Tonon, Daniel Vodák, Takafumi N Yamaguchi, Sergi Beltran Agullo, Marc Dabad, Robert E Denroche, Philip Ginsbach, Simon C Heath, Emanuele Raineri, Charlotte L Anderson, Benedikt Brors, Ruben Drews, Roland Eils, Akihiro Fujimoto, Francesc Castro Giner, Minghui He, Pablo Hennings-Yeomans, Barbara Hutter, Natalie Jäger, Rolf Kab

10.1101/012997 — Posted: 2014-12-24

An Approximate Bayesian Computation Approach to Examining the Phylogenetic Relationships among the Four Gibbon Genera using Whole Genome Sequence Data

Krishna Veeramah, August E Woerner, Laurel Johnstone, Ivo Gut, Marta Gut, Tomas Marques-Bonet, Lucia Carbone, Jeff D Wall, Michael F Hammer

10.1101/009498 — Posted: 2014-09-22

Disentangling Multidimensional Spatio-Temporal Data into their Common and Aberrant Responses

Young Hwan Chang, Jim Korkola, Dhara N. Amin, Mark M. Moasser, Jose M. Carmena, Joe W. Gray, Claire J. Tomlin

10.1101/004259 — Posted: 2014-04-28

Exact Reconstruction of Gene Regulatory Networks using Compressive Sensing

Young Hwan Chang, Joe W. Gray, Claire J. Tomlin

10.1101/004242 — Posted: 2014-04-20

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