Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

3402 Articles

Active learnings impact on student course performance in STEM varies by type and intensity

Xu, S., Velasco, V., Hill, M. J., Tran, E., Agrawal, S., Arroyo, E. N., Behling, S., Chambwe, N., Cintron, D. L., Cooper, J. D., Dunster, G., Grummer, J. A., Hennessey, K., Hsiao, J., Iranon, N., Jones, L., Jordt, H., Keller, M., Lacey, M. E., Littlefield, C. E., Lowe, A., Newman, S., Okolo, V., Olroyd, S., Peecook, B. R., Pickett, S. B., Slager, D. L., Caviedes-Solis, I. W., Stanchak, K. E., Sundaravaradan, V., Valdebenito, C., Williams, C. R., Zinsli, K. A., Freeman, S., Theobald, E. J.

10.1101/2025.06.01.657285 — Posted: 2025-06-02

Omic Risk Scores are Associated with COPD-related Traits Across Three Cohorts

Konigsberg, I. R., Vargas, L. B., Pratte, K. A., Guzman, D. E., Pottinger, T. D., Buschur, K. L., Blackwell, T. W., Liu, Y., Taylor, K. D., Johnson, W. C., Durda, P., Tracy, R. P., Manichaikul, A., Oelsner, E. C., Gabriel, S., Gupta, N., Onengut-Gumuscu, S., Smith, J. D., Aguet, F., Ardlie, K., Tahir, U. A., Gerszten, R. E., Clish, C., Bleecker, E. R., Meyers, D. A., Ortega, V. E., Christenson, S. A., DeMeo, D. L., Hobbs, B. D., Hersh, C. P., Castaldi, P. J., Curtis, J. L., Barr, R. G., Rotter, J. I., Rich, S. S., Woodruff, P. G., Silverman, E. K., Cho, M. H., Kechris, K. J., Bowler, R. P., La

10.1101/2025.06.01.25328699 — Posted: 2025-06-02

An atlas of TF driven gene programs across human cells

Pett, J. P., Prete, M., Pham, D., England, N., Yuan, H., Prigmore, E., Tuck, L., Oszlanczi, A., To, K., Xu, C., Suo, C., Dann, E., He, P., Kedlian, V. R., Kanemaru, K., Cranley, J., Yang, L., Elmentaite, R., Oliver, A. J., Cujba, A.-M., Cakir, B., Murray, S., Mahbubani, K. T., Saeb-Parsy, K., Gambardella, L., Kasper, M., Haniffa, M. A., Nawijn, M. C., Teichmann, S. A., Meyer, K. B.

10.1101/2025.05.30.657075 — Posted: 2025-06-01

Genome-wide CRISPR screens identify PTGES3 as a novel AR modulator

Li, H., Melnyk, J. E., Fu, B. X. H., Shrestha, R., Zhang, M., Sjostrom, M., Feng, S., Anderson, J., Han, W., Chesner, L. N., Shin, H. J., Farsh, T., Suarez, H. J., Nath, S., Chou, J., Das, R., Egusa, E. A., Calvert, M., Kishishita, A., Barpanda, A., Zhu, J., Maheshwari, A., Chen, W. S., Alshalalfa, M., Winters, A., Hua, J. T., Liu, T., Davicioni, E., Wiita, A. P., Stohr, B. A., Siddiqui, J., Huang, B., Small, E. J., Shokat, K. M., Nelson, P., Quigley, D. A., Wasmuth, E. V., Gilbert, L. A., Feng, F. Y.

10.1101/2025.05.29.656244 — Posted: 2025-05-31

Complex I Drives Glutamine-Dependent TCA Cycle to Support Viability of MYChigh Breast Cancer Cells

Anttila, J. M., Savelius, M., Somani, J., Nicorici, D., Munne, P. M., Id, L., Peura, A., Hiltunen, A. O., Aung, J., Awadhpersad, R., Prajapati, B., Peltonen, M., Ala-Hongisto, H., Gautam, P., Valimaki, M. J., Tervonen, T. A., Sapovalovaite, K., Devarajan, R., Perez, M. V. R., Mutka, M., Kovanen, P., Niinikoski, L., Meretoja, T., Mattson, J., Heikkila, P., Wennerberg, K., Arsenian-Henriksson, M., Westermarck, J., Aittokallio, T., Goga, A., Jackson, C. B., Nieminen, A. I., Klefstrom, J.

10.1101/2025.05.27.656356 — Posted: 2025-05-31

Caffeine Impairs Red Blood Cell Storage Quality by Dual Inhibition of ADORA2b Signaling and G6PD Activity

Dzieciatkowska, M., Hay, A., Issaian, A., Keele, G. R., Bevers, S., Nemkov, T., Reisz, J. A., Maslanka, M., Stephenson, D., Moore, A., Deng, X., Stone, M., Hansen, K., Kleinman, S., Norris, P. J., Busch, M. P., Page, G. P., Roubinian, N. H., Xia, Y., Zimring, J. C., D'Alessandro, A.

10.1101/2025.05.27.656446 — Posted: 2025-05-30

A non-spike nucleocapsid R204P mutation in SARS-CoV-2 Omicron XEC enhances inflammation and pathogenicity

Tsujino, S., Tsuda, M., Ito, J., Deguchi, S., Taha, T. Y., Nasser, H., Wang, L., Rosecrans, J., Suzuki, R., Suzuki, S., Yoshimatsu, K., Ott, M., The Genotype to Phenotype Japan (G2P-Japan) Consortium, , Ikeda, T., Takayama, K., Sato, K., Tanaka, S., Tamura, T., Fukuhara, T.

10.1101/2025.05.28.656516 — Posted: 2025-05-30

Convergent large-scale network and local vulnerabilities underlie brain atrophy across Parkinson's disease stages: a worldwide ENIGMA study

Vo, A., Tremblay, C., Rahayel, S., Al-Bachari, S., Berendse, H. W., Bright, J. K., Cendes, F., d'Angremont, E., Dalrymple-Alford, J. C., Debove, I., Dirkx, M. F., Druzgal, J., Garraux, G., Helmich, R. C., Hu, M., Jahanshad, N., Johansson, M. E., Klein, J. C., Laansma, M. A., McMillan, C. T., Melzer, T. R., Misic, B., Mosley, P., Owens-Walton, C., Parkes, L. M., Pellicano, C., Piras, F., Poston, K. L., Rango, M., Rummel, C., Schwingenschuh, P., Suette, M., Thompson, P. M., Tosun, D., Tsai, C.-C., van Balkom, T. D., van den Heuvel, O. A., van der Werf, Y. D., van Heese, E. M., Vriend, C., Wang

10.1101/2025.05.25.25326586 — Posted: 2025-05-29

Advancing CNS tumor diagnostics with expanded DNA methylation-based classification

Sill, M., Schrimpf, D., Patel, A., Sturm, D., Jaeger, N., Sievers, P., Schweizer, L., Banan, R., Reuss, D., Suwala, A., Korshunov, A., Stichel, D., Wefers, A. K., Hau, A.-C., Boldt, H., Harter, P. N., Abdullaev, Z., Benhamida, J., Teichmann, D., Koch, A., Hench, J., Frank, S., Hasselblatt, M., Mansouri, S., Diaz de Stahl, T., Serrano, J., Ecker, J., Selt, F., Taylor, M., Ramaswamy, V., Cavalli, F., Berghoff, A. S., Bison, B., Blattner-Johnson, M., Buchhalter, I., Buslei, R., Calaminus, G., Dikow, N., Dohmen, H., Euskirchen, P., Fleischhack, G., Gajjar, A., Gerber, N. U., Gessi, M., Gielen, G.

10.1101/2025.05.28.25328344 — Posted: 2025-05-29

Multivalent Lipid MVL5 Micellar Nanoparticles Exhibit Dramatically Increased Loading of Paclitaxel with PEGylation Enhancing Human Cancer Cell Penetration Depth and Cytotoxicity

Fisher, W. S., Ghasemizadeh, A., Roshan, S., Goldstein, A., Douglas, J., Perez, R., Li, Y., Ewert, K. K., Safinya, C. R.

10.1101/2025.05.24.655953 — Posted: 2025-05-29

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