Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

3177 Articles

Peripheral blood mononuclear cell transcriptomic trajectories reveal dynamic regulation of inflammatory actors in delirium

LaHue, S. C., Takegami, N., Simmasalam, R., Baqai, A., Munoz, E., Sikri, A., du Buisson de Courson, T., Singhal, N. S., Eckalbar, W., Langelier, C. R., Hendrickson, C. M., Calfee, C. S., Erle, D. J., Krummel, M. F., Woodruff, P. G., Oskotsky, T., Sirota, M., Ferguson, A. R., Douglas, V. C., Newman, J. C., Pleasure, S. J., Wilson, M. R., COMET consortium, , Singhal, N. S.

10.1101/2025.02.14.25322163 — Posted: 2025-02-20

Associations between residential segregation, ambient air pollution, and hippocampal features in recent trauma survivors

Liang, S. S., Roeckner, A. R., Ely, T. D., Lebois, L. A. M., van Rooij, S. J. H., Bruce, S. E., Jovanovic, T., House, S. L., Beaudoin, F. L., An, X., Neylan, T. C., Clifford, G. D., Linnstaedt, S. D., Germine, L. T., Rauch, S. L., Haran, J. P., Storrow, A. B., Lewandowski, C., Musey, P. I., Hendry, P. L., Sheikh, S., Pascual, J. L., Seamon, M. J., Harris, E., Pearson, C., Peak, D. A., Merchant, R. C., Domeier, R. M., Rathlev, N. K., O'Neil, B. J., Sergot, P., Sanchez, L. D., Sheridan, J. F., Harte, S. E., Kessler, R. C., Koenen, K. C., McLean, S. A., Ressler, K. J., Stevens, J. S., Webb, E. K.

10.1101/2025.02.18.25322464 — Posted: 2025-02-20

Human precentral gyrus neurons link speech sequences from listening to speaking

Xu, D., Chung, J. E., Silva, A. B., Greicius, Q. R., Metzger, S. L., Zhang, Y., Leonard, M. K., Aghi, M. K., Hervey-Jumper, S. L., Chang, E. F.

10.1101/2024.12.27.630563 — Posted: 2025-02-20

Type 2 diabetes polygenic risk score demonstrates context-dependent effects and associations with type 2 diabetes-related risk factors and complications across diverse populations

Guo, B., Cai, Y., Kim, D., Smit, R. A. J., Wang, Z., Iyer, K. R., Hilliard, A. T., Haessler, J., Tao, R., Broadaway, K. A., Wang, Y., Pozdeyev, N., Staeger, F. F., Yang, C., Vanderwerff, B., Patki, A. D., Stalbow, L., Lin, M., Rafaels, N., Shortt, J., Wiley, L., Stanislawski, M., Pattee, J., Davis, L., Straub, P. S., Shuey, M. M., Cox, N. J., Lee, N. R., Jorgensen, M. E., Bjerregaard, P., Larsen, C., Hansen, T., Moltke, I., Meigs, J. B., Stram, D. O., Yin, X., Zhou, X., Chang, K.-M., Clarke, S. L., Guarischi-Sousa, R., Lankester, J., Tsao, P. S., Buyske, S., Graff, M., Raffield, L. M., Sun, Q.

10.1101/2025.02.15.25322341 — Posted: 2025-02-20

Identification of a conserved subset of cold tumors responsive to immune checkpoint blockade

Moore, J., Gkantalis, J., Guix, I., Chou, W., Yuen, K., Lazar, A., Spitzer, M. H., Combes, A., Barcellos-Hoff, M. H.

10.1101/2024.03.06.583752 — Posted: 2025-02-19

Sensitive and modular amplicon sequencing of Plasmodium falciparum diversity and resistance for research and public health

Aranda-Diaz, A., Vickers, E. N., Murie, K., Palmer, B., Hathaway, N., Gerlovina, I., Boene, S., Garcia-Ulloa, M., Cistero, P., Katairo, T., Semakuba, F. D., Nsengimaana, B., Gwarinda, H., Garcia-Fernandez, C., Louie, W., Esayas, E., Da Silva, C., Datta, D., Kiyaga, S., Wiringilimaana, I., Fekele, S. M., Bennett, A., Smith, J. L., Gadisa, E., Parr, J. B., Conrad, M., Raman, J., Tukwasibwe, S., Ssewanyana, I., Rovira-Vallbona, E., Tato, C. M., Briggs, J., Mayor, A., Greenhouse, B.

10.1101/2024.08.22.609145 — Posted: 2025-02-19

Comorbidity analysis and clustering of endometriosis patients using electronic health records

Khan, U., Oskotsky, T. T., Yilmaz, B. D., Roger, J., Gjoni, K., Irwin, J. C., Opoku-Anane, J., Elhadad, N., Giudice, L. C., Sirota, M.

10.1101/2025.02.13.25322244 — Posted: 2025-02-19

Near 100% efficient homology-dependent genome engineering in the human fungal pathogen Cryptococcus neoformans

Nalley, M., Banerjee, S., Huang, M. Y., Madhani, H. D.

10.1101/2025.02.14.638277 — Posted: 2025-02-18

Shc1 cooperates with Frs2 and Shp2 to recruit Grb2 in FGF-induced lens development

Wang, Q., Li, H., Mao, Y., Garg, A., Park, E. S., Wu, Y., Chow, A., Peregrin, J., Zhang, X.

10.1101/2024.10.20.619055 — Posted: 2025-02-17

Finding the Clinical Traces of Cognitive Impairment in Patients with Heart Failure: A Natural Language Processing Study of Clinical Letters from Routine Care

Overmars, L. M., Van Es, B., Tan, S. C., Vonk, J. M. J., Muller, M., De Groot, M. C. H., Biessels, G. J., Van der Meer, M. G., Van Solinge, W. W., Haitjema, S., Bots, M., Exalto, L. G.

10.1101/2025.02.12.25322151 — Posted: 2025-02-17

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