Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

3098 Articles

3D multiplexed tissue imaging reconstruction and optimized region-of-interest (ROI) selection through deep learning model of channels embedding

Burlingame, E., Ternes, L., Lin, J.-R., Chen, Y.-A., Kim, E. N., Gray, J. W., Santagata, S., Sorger, P. K., Chang, Y. H.

10.1101/2022.12.09.519807 — Posted: 2022-12-12

An ESCRT-dependent pathway of Nuclear and Cytoplasmic Spatial PQC is coordinated at Nuclear Vacuolar Junctions

Sontag, E. M., Morales-Polanco, F., Chen, J.-H., McDermott, G., Dolan, P. T., Gestaut, D. R., LeGros, M. A., Larabell, C., Frydman, J.

10.1101/2022.12.01.518779 — Posted: 2022-12-10

Novel Peptide Inhibitor of Human Tumor Necrosis Factor-α has Antiarthritic Activity

Sahu, D., Gupta, C., Yennamalli, R., Sharma, S., Roy, S., Hasan, S., Gupta, P., Sharma, V. K., Kashyap, S., Kumar, S., Dwivedi, V. P., Panda, A. K., Das, H. R., Liu, C.-J.

10.1101/2022.12.06.519274 — Posted: 2022-12-10

Increased mRNA expression of CDKN2A is a transcriptomic marker of clinically aggressive meningiomas

Wang, J. Z., Patil, V., Liu, J., Dogan, H., Behling, F., Skardelly, M., Tatagiba, M., Hoffman, E., Bunda, S., Yakubov, R., Kaloti, R., Brandner, S., Gao, A., Cohen-Gadol, A., Barnholtz-Sloan, J., Raleigh, D., Sahm, F., Boutros, P. C., Tabatabai, G., Aldape, K., Nassiri, F., Zadeh, G., International Consortium on Meningiomas (ICOM)

10.1101/2022.12.07.519545 — Posted: 2022-12-10

Sleep is required for odor exposure to consolidate memory and remodel olfactory synapses

Chandra, R., Farah, F., Munoz-Lobato, F., Bokka, A., Benedetti, K. L., Brueggemann, C., Saifuddin, F. M., Miller, J. M., Li, J., Chang, E., Varshney, A., Jiminez, V., Baradwaj, A., Nassif, C., Alladin, S., Andersen, K. E., Bi, V., Garcia, A. J., Nordquist, S. K., Dunn, R. L., Tokalenko, K., Soohoo, E., Garcia, V., Kaur, S., Harris, M., Briseno, F., Fung, B., Bykov, A., Guillen, H., Byrd, D., Odisho, E., Tsujimoto, B., Tran, A., Duong, A., Daigle, K. C., Paisner, R., Zuazo, C. E., Churgin, M., Fang-Yen, C., Bremer, M., Kato, S., L'Etoile, N. D., VanHoven, M.

10.1101/2020.11.24.395228 — Posted: 2022-12-08

Mild SARS-CoV-2 infection results in long-lasting microbiota instability

Upadhyay, V., Suryawanshi, R., Tasoff, P., McCavitt-Malvido, M., Kumar, G. R., Murray, V., Noecker, C., Bisanz, J. E., Hswen, Y., Ha, C., Sreekumar, B., Chen, I. P., Lynch, S. V., Ott, M., Lee, S., Turnbaugh, P. J.

10.1101/2022.12.07.519508 — Posted: 2022-12-08

Cortical structure of neural synchrony and information flow during transition from wakefulness to light non-rapid eye movement sleep

Fan, J. M., Kudo, K., Verma, P., Ranasinghe, K. G., Morise, H., Findlay, A. M., Vossel, K. A., Kirsch, H. E., Raj, A., Krystal, A. D., Nagarajan, S. S.

10.1101/2022.03.09.483562 — Posted: 2022-12-08

Pleiotropy of autism-associated chromatin regulators

Lasser, M., Sun, N., Xu, Y., Law, K., Gonzalez, S., Wang, B., Drury, V., Drake, S., Zaltsman, Y., Dea, J., Bader, E., McCluskey, K. E., State, M. W., Willsey, A. J., Willsey, H. R.

10.1101/2022.12.07.519375 — Posted: 2022-12-07

Visualizing somatic alterations in spatial transcriptomics data of skin cancer

Chen, L., Chang, D., Tandukar, B., Deivendran, D., Cho, R., Cheng, J., Bastian, B. C., Ji, A. L., Shain, A. H.

10.1101/2022.12.05.519162 — Posted: 2022-12-07

RNA conformational propensities determine cellular activity

Kelly, M. L., Roy, R., Geng, A., Ganser, L. R., Manghrani, A., Cullen, B. R., Schulze-Gahmen, U., Herschlag, D., Al-Hashimi, H. M.

10.1101/2022.12.05.519207 — Posted: 2022-12-07

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