Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

2397 Articles

Single cell transcriptome analysis defines heterogeneity of the murine pancreatic ductal tree

Hendley, A. M., Rao, A. A., Leonhardt, L., Ashe, S., Smith, J. A., Giacometti, S., Peng, X. L., Jiang, H., Berrios, D., Pawlak, M., Li, L. Y., Lee, J., Collisson, E. A., Anderson, M., Fragiadakis, G. K., Yeh, J. J., Chun, J. Y., Kim, G. E., Weaver, V. M., Hebrok, M.

10.1101/2020.10.12.336784 — Posted: 2021-02-22

Glioblastoma remodeling of neural circuits in the human brain decreases survival

Krishna, S., Choudhury, A., Seo, K., Ni, L., Kakaizada, S., Lee, A., Aabedi, A., Cao, C., Sudharshan, R., Egladyous, A., Almeida, N., Venkatesh, H., Findlay, A., Nagarajan, S., Raleigh, D., Brang, D., Monje, M., Hervey-Jumper, S.

10.1101/2021.02.18.431915 — Posted: 2021-02-19

Phenotypic analysis of catastrophic childhood epilepsy genes: The Epilepsy Zebrafish Project

Griffin, A., Carpenter, C., Liu, J., Paterno, R., Grone, B., Hamling, K., Moog, M., Dinday, M. T., Figueroa, F., Anvar, M., Ononuju, C., Qu, T., Baraban, S. C.

10.1101/2021.02.11.430844 — Posted: 2021-02-13

Integrated plasma proteomic and single-cell immune signaling network signatures demarcate mild, moderate, and severe COVID-19

Feyaerts, D., Hedou, J., Gillard, J., Chen, H., Tsai, E. S., Peterson, L. S., Ando, K., Manohar, M., Do, E., Dhondalay, G. K. R., Fitzpatrick, J., Artandi, M., Chang, I., Snow, T. T., Chinthrajah, R. S., Warren, C. M., Wittman, R., Meyerowitz, J. G., Ganio, E. A., Stelzer, I. A., Han, X., Verdonk, F., Gaudilliere, D. K., Mukherjee, N., Tsai, A. S., Rumer, K. K., Jiang, S. J., Valdes-Ferrer, S. I., Kelly, J. D., Furman, D., Aghaeepour, N., Angst, M. S., Boyd, S. D., Pinsky, B. A., Nolan, G. P., Nadeau, K. C., Gaudilliere, B., McIlwain, D. R.

10.1101/2021.02.09.430269 — Posted: 2021-02-12

Identifying the genetic basis and molecular mechanisms underlying phenotypic correlation between complex human traits using a gene-based approach

Gu, J., Fuller, C. K., Zheng, J., Li, H.

10.1101/2021.02.09.430368 — Posted: 2021-02-10

Mapping Transcriptomic Vector Fields of Single Cells

Qiu, X., Zhang, Y., Hosseinzadeh, S., Yang, D., Pogson, A. N., Wang, L., Shurtleff, M., Yuan, R., Xu, S., Ma, Y., Replogle, J., Darmanis, S., Xing, J., Weissman, J.

10.1101/696724 — Posted: 2021-02-09

Genomic epidemiology identifies emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States

Washington, N. L., Gangavarapu, K., Zeller, M., Bolze, A., Cirulli, E. T., Schiabor Barrett, K. M., Larsen, B. B., Anderson, C., White, S., Cassens, T., Jacobs, S., Levan, G., Nguyen, J., Ramirez, J. M., Rivera-Garcia, C., Sandoval, E., Wang, X., Wong, D., Spencer, E., Robles-Sikisaka, R., Kurzban, E., Hughes, L. D., Deng, X., Wang, C., Servellita, V., Valentine, H., De Hoff, P., Seaver, P., Sathe, S., Gietzen, K., Sickler, B., Antico, J., Hoon, K., Liu, J., Harding, A., Bakhtar, O., Basler, T., Austin, B., Isaksson, M., Febbo, P., Becker, D., Laurent, M., McDonald, E., Yeo, G. W., Knight, R.

10.1101/2021.02.06.21251159 — Posted: 2021-02-07

Convalescent Plasma and Improved Survival in Patients with Hematologic Malignancies and COVID-19

Thompson, M. A., Henderson, J. P., Shah, P. K., Rubinstein, S. M., Joyner, M. J., Choueiri, T. K., Flora, D. B., Griffiths, E. A., Gulati, A. P., Hwang, C., Koshkin, V. S., Papadopoulos, E. B., Robilotti, E. V., Su, C. T., Wulff-Burchfield, E. M., Xie, Z., Yu, P. P., Mishra, S., Senefeld, J. W., Shah, D. P., Warner, J. L., COVID-19 and Cancer Consortium

10.1101/2021.02.05.21250953 — Posted: 2021-02-05

Distinctive features of SARS-CoV-2-specific T cells predict recovery from severe COVID-19

Neidleman, J., Luo, X., George, A. F., McGregor, M., Yang, J., Yun, C., Murray, V., Gill, G., Greene, W. C., Vasquez, J., Lee, S., Ghosn, E., Lynch, K., Roan, N. R.

10.1101/2021.01.22.21250054 — Posted: 2021-02-05

Cofilin pathology is a new player on α-synuclein-induced spine impairment in models of hippocampal synucleinopathy

Oliveira da Silva, M. I., Santejo, M., Babcock, I. W., Magalhaes, A., Minamide, L. S., Castillo, E., Gerhardt, E., Fahlbusch, C., Swanson, R. A., Outeiro, T. F., Bamburg, J. R., Liz, M. A.

10.1101/2021.02.02.425931 — Posted: 2021-02-02

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