bioRxiv/medRxiv TRiP Review Activity

676 Reviews — All Partners — Microbiology

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Efficiently processing amplicon sequencing data for microbial ecology with dadasnake, a DADA2 implementation in Snakemake
Weissbecker, C., Schnabel, B., Heintz-Buschart, A.
10.1101/2020.05.17.095679 — Posted: 2020-05-19 — Discussion: 2022-01-24  GigaScience
Community composition and development of the post-weaning piglet gut microbiome
Gaio, D., DeMaere, M. Z., Anantanawat, K., Eamens, G. J., Liu, M., Zingali, T., Falconer, L., Chapman, T. A., Djordjevic, S. P., Darling, A. E.
10.1101/2020.07.20.211326 — Posted: 2020-07-20 — Discussion: 2022-01-24  GigaScience
Scientometric Trends for Coronaviruses and Other Emerging Viral Infections
Kagan, D., Moran-Gilad, J., Fire, M.
10.1101/2020.03.17.995795 — Posted: 2020-03-20 — Discussion: 2022-01-24  GigaScience
NanoAmpli-Seq: A workflow for amplicon sequencing from mixed microbial communities on the nanopore sequencing platform
Calus, S. T., Ijaz, U. Z., Pinto, A. J.
10.1101/244517 — Posted: 2018-01-07 — Discussion: 2022-01-22  GigaScience
Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH
Rensen, E. I., Pietropaoli, S., Weber, C., Souquere, S., Isnard, P., Rabant, M., Gibier, J.-B., Simon-Loriere, E., Rameix-Welti, M.-A., Pierron, G., Mueller, F., Barba-Spaeth, G., Zimmer, C.
10.1101/2021.02.04.429604 — Posted: 2021-02-04 — Discussion: 2022-01-21  EMBO Press
Inhibiting Host Protein Deposition on Urinary Catheters Reduces Urinary Tract Infections
Andersen, M. J., Fong, C., LaBella, A. A., Molesan, A. J., Champion, M. M., Howell, C., Flores-Mireles, A. L.
10.1101/2021.12.07.471578 — Posted: 2021-12-07 — Discussion: 2022-01-21  eLife
A combined meta-barcoding and shotgun metagenomic analysis of spontaneous wine fermentation
Sternes, P. R., Lee, D., Kutyna, D. R., Borneman, A. R.
10.1101/098061 — Posted: 2017-01-10 — Discussion: 2022-01-13  GigaScience
Multi-Locus And Ultra-Long Amplicon Sequencing Approach To Study Microbial Diversity At Species Level Using The MinION™ Portable Nanopore Sequencer
Benitez-Paez, A., Sanz, Y.
10.1101/117143 — Posted: 2017-03-15 — Discussion: 2022-01-13  GigaScience
Helical Ordering of Envelope Associated Proteins and Glycoproteins in Respiratory Syncytial Virus Filamentous Virions
Conley, M. J., Short, J. M., Hutchings, J., Burns, A. M., Streetley, J., Bakker, S. E., Jaffery, H., Stewart, M., Power, B. J., Zanetti, G., Fearns, R., Vijayakrishnan, S., Bhella, D.
10.1101/2021.08.04.455049 — Posted: 2021-08-04 — Discussion: 2022-01-11  EMBO Press
Immunometabolic hijacking of immune cells by a Pseudomonas aeruginosa quorum-sensing signal
Bandyopadhaya, A., Singh, V. K., Chakraborty, A., Tzika, A. A., Rahme, L. G.
10.1101/2021.10.03.462785 — Posted: 2021-10-03 — Discussion: 2022-01-04  eLife

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