Channel:  European Molecular Biology Laboratory (EMBL)

335 Articles

Distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
Lun, A., Riesenfeld, S., Andrews, T., Dao, T. P., Gomes, T., participants in the 1st Human Cell Atlas Jamboree, , Marioni, J.
10.1101/234872 — Posted: 2018-12-05
Super-resolution fight club: A broad assessment of 2D & 3D single-molecule localization microscopy software
Sage, D., Pham, T.-A., Babcock, H., Lukes, T., Pengo, T., Chao, J., Velmurugan, R., Herbert, A., Agrawal, A., Colabrese, S., Wheeler, A., Archetti, A., Rieger, B., Ober, R., Hagen, G. M., Sibarita, J.-B., Ries, J., Henriques, R., Unser, M., Holden, S.
10.1101/362517 — Posted: 2018-12-01
Quantification of differential transcription factor activity and multiomics-based classification into activators and repressors: diffTF
Berest, I., Arnold, C., Reyes-Palomares, A., Palla, G., Rasmussen, K. D., Helin, K., Zaugg, J.
10.1101/368498 — Posted: 2018-12-01
Cardelino: Integrating whole exomes and single-cell transcriptomes to reveal phenotypic impact of somatic variants
McCarthy, D. J., Rostom, R., Huang, Y., Kunz, D. J., Danecek, P., Bonder, M. J., Hagai, T., HipSci Consortium, , Wang, W., Gaffney, D. J., Simons, B. D., Stegle, O., Teichmann, S. A.
10.1101/413047 — Posted: 2018-11-26
Protein inference using PIA workflows and PSI standard file formats
Uszkoreit, J., Perez-Riverol, Y., Eggers, B., Marcus, K., Eisenacher, M.
10.1101/424473 — Posted: 2018-11-21
Topological data analysis quantifies biological nano-structure from single molecule localization microscopy
Pike, J. A., Khan, A. O., Pallini, C., Thomas, S. G., Mund, M., Ries, J., Poulter, N. S., Styles, I. B.
10.1101/400275 — Posted: 2018-11-13
Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity
Linker, S. M., Urban, L., Clark, S., Chhatriwala, M., Amatya, S., McCarthy, D., Ebersberger, I., Vallier, L., Reik, W., Stegle, O., Bonder, M. J.
10.1101/328138 — Posted: 2018-11-06
Iron deficiency affects early stages of embryonic hematopoiesis but not the endothelial to hematopoietic transition
Shvartsman, M., Bilican, S., Lancrin, C.
10.1101/462978 — Posted: 2018-11-05
The transcriptome-wide landscape and modalities of EJC binding in adult Drosophila
Obrdlik, A., Lin, G., Haberman, N., Ule, J., Ephrussi, A.
10.1101/459354 — Posted: 2018-11-04
Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm
Bliven, S. E., Lafita, A., Rose, P. W., Capitani, G., Prlic, A., Bourne, P.
10.1101/297960 — Posted: 2018-10-30

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