bioRxiv/medRxiv TRiP Review Activity

16 Reviews — GigaScience — Plant Biology

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Open RGB Imaging Workflow for Morphological and Morphometric Analysis of Fruits using AI: A Case Study on Almonds.
Mas-Gomez, J., Rubio, M., Dicenta, F., Martinez-Garcia, P. J.
10.1101/2025.05.05.652179 — Posted: 2025-05-06 — Discussion: 2026-01-05  GigaScience
The FIP 1.0 Data Set: Highly Resolved Annotated Image Time Series of 4,000 Wheat Plots Grown in Six Years
Roth, L., Boss, M., Kirchgessner, N., Aasen, H., Aguirre-Cuellar, B. P., Akiina, P. P. A., Anderegg, J., Gajardo Castillo, J., Chen, X., Corrado, S., Cybulski, K., Keller, B., Kortstee, S. G., Kronenberg, L., Liebisch, F., Nousi, P., Oppliger, C., Perich, G., Pfeifer, J., Yu, K., Storni, N., Tschurr, F., Volpi, M., Treier, S., Zellweger, H., Zumsteg, O., Hund, A., Walter, A.
10.1101/2024.10.04.616624 — Posted: 2024-10-05 — Discussion: 2025-07-08  GigaScience
Finding the LMA needle in the wheat proteome haystack.
Vincent, D., Bui, A., Ram, D., Ezernieks, V., Shahinfar, S., Luke, T., Rochfort, S., Rigas, N., Panozzo, J., Daetwyler, H., Hayden, M. J.
10.1101/2023.01.22.525108 — Posted: 2023-01-23 — Discussion: 2024-01-02  GigaScience
Association Mapping Across a Multitude of Traits Collected in Diverse Environments Identifies Pleiotropic Loci in Maize.
Mural, R. V., Sun, G., Grzybowski, M., Tross, M. C., Jin, H., Smith, C., Newton, L., Andorf, C. M., Woodhouse, M. R., Thompson, A. M., Sigmon, B. V., Schnable, J. C.
10.1101/2022.02.25.480753 — Posted: 2022-02-25 — Discussion: 2023-02-17  GigaScience
A chromosome-level reference genome of Ensete glaucum gives insight into diversity, chromosomal and repetitive sequence evolution in the Musaceae
Wang, Z., Rouard, M., Biswas, M. K., Droc, G., Cui, D., Roux, N., Baurens, F.-C., Ge, X.-J., Schwarzacher, T., Heslop-Harrison, J., Liu, Q.
10.1101/2021.11.23.469474 — Posted: 2021-11-24 — Discussion: 2023-02-15  GigaScience
Predicting plant biomass accumulation from image-derived parameters
Dijun Chen, Rongli Shi, Jean-Michel Pape, Christian Klukas
10.1101/046656 — Posted: 2016-03-31 — Discussion: 2022-06-23  GigaScience
LED light gradient as a screening tool for light quality responses in model plant species
Lejeune, P., Fratamico, A., Bouche, F., Huerga-Fernandez, S., Tocquin, P., Perilleux, C.
10.1101/2020.10.08.320002 — Posted: 2020-10-08 — Discussion: 2022-03-14  GigaScience
Pseudo-chromosome length genome assembly of a double haploid ‘Bartlett’ pear (Pyrus communis L.)
Linsmith, G., Rombauts, S., Montanari, S., Deng, C. H., Celton, J.-M., Guerif, P., Liu, C., Lohaus, R., Zurn, J. D., Cestaro, A., Bassil, N. V., Bakker, L. V., Schijlen, E., Gardiner, S. E., Lespinasse, Y., Durel, C.-E., Velasco, R., Neale, D. B., Chagne, D., Van de Peer, Y., Troggio, M., Bianco, L.
10.1101/651778 — Posted: 2019-05-27 — Discussion: 2022-03-14  GigaScience
Conventional and hyperspectral time-series imagingof maize lines widely used in field trials
Liang, Z., Pandey, P., Stoerger, V., Xu, Y., Qiu, Y., Ge, Y., Schnable, J. C.
10.1101/169045 — Posted: 2017-07-28 — Discussion: 2022-02-20  GigaScience
Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large scale genetic studies
Atkinson, J. A., Lobet, G., Noll, M., Meyer, P. E., Griffiths, M., Wells, D. M.
10.1101/152702 — Posted: 2017-06-20 — Discussion: 2022-01-31  GigaScience

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