bioRxiv/medRxiv TRiP Review Activity

493 Reviews — All Partners — Biophysics

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Interpretable Protein-DNA Interactions Captured by Structure-based Optimization
Zhang, Y., Silvernail, I., Lin, Z., Lin, X.
10.1101/2024.05.26.595895 — Posted: 2024-05-27 — Discussion: 2025-06-09  eLife
Physical constraints and biological regulations underlie universal osmoresponses
Ye, Y., Wang, Q., Lin, J.
10.1101/2024.07.02.601668 — Posted: 2024-07-04 — Discussion: 2025-06-06  eLife
Transition-based reweighting and neural rational inference analysis of effects of new psychoactive substances on cannabinoid receptors
Dutta, S., Shukla, D.
10.1101/2023.09.29.560261 — Posted: 2023-10-02 — Discussion: 2025-06-06  eLife
Harnessing AlphaFold to reveal state secrets: Prediction of hERG closed and inactivated states
Ngo, K., Yarov-Yarovoy, V., Clancy, C. E., Vorobyov, I.
10.1101/2024.01.27.577468 — Posted: 2024-01-30 — Discussion: 2025-06-05  eLife
Expanding Automated Multiconformer Ligand Modeling to Macrocycles and Fragments
Flowers, J., Echols, N., Correy, G., Jaishankar, P., Togo, T., Renslo, A. R., van den Bedem, H., Fraser, J. S., Wankowicz, S. A.
10.1101/2024.09.20.613996 — Posted: 2024-09-23 — Discussion: 2025-06-05  eLife
Cellular (de)coordination in gliding motility and plectoneme formation
Rosko, J., Cremin, K., Locatelli, E., Coates, M., Duxbury, S. J. N., Soyer, O. S., Croft, K., Randall, K., Valeriani, C., Polin, M.
10.1101/2024.02.06.579126 — Posted: 2024-02-06 — Discussion: 2025-05-30  eLife
p53 isoforms have a high aggregation propensity, interact with chaperones and lack binding to p53 interaction partners
Brdar, A., Osterburg, C., Münick, P., Machel, A. C., Rathore, R., Osterburg, S., Yüksel, B., Schäfer, B., Desch, K., Langer, J. D., Dikic, I., Dötsch, V.
10.1101/2024.10.02.616239 — Posted: 2024-10-06 — Discussion: 2025-05-23  eLife
Matrix-driven jamming dynamics mediates transition of ovarian cancer spheroids to stable morphologies
Dutt, T., Langthasa, J., U, M., Sen, P., Bhat, R.
10.1101/2022.02.09.479678 — Posted: 2022-02-09 — Discussion: 2025-05-20  EMBO Press
Mechanical forces and ligand-binding modulate Pseudomonas aeruginosa PilY1 mechanosensitive protein
Cao-Garcia, F. J., Walker, J. E., Board, S. M., Alonso-Caballero, A.
10.1101/2023.08.03.551776 — Posted: 2023-08-04 — Discussion: 2025-05-20  EMBO Press
Spiral-eyes: A soft active matter model of in vivo corneal epithelial cell migration
Kostanjevec, K., Sknepnek, R., Collinson, J. M., Henkes, S.
10.1101/2024.08.14.608002 — Posted: 2024-08-18 — Discussion: 2025-05-14  eLife

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