bioRxiv/medRxiv TRiP Review Activity

637 Reviews — All Partners — Microbiology

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Resource landscape shapes the composition and stability of the human vaginal microbiota
Kamiya, T., Sofonea, M. T., France, M., Tessandier, N., Bravo, I. G., Murall, C. L., Ravel, J., Alizon, S.
10.1101/2024.11.12.622464 — Posted: 2024-11-12 — Discussion: 2025-09-14  Peer Community In
The increase in cell volume and nuclear number of the koji-fungus Aspergillus oryzae contributes to its high enzyme productivity
Itani, A., Motomura, H., Oda, K., Yamashita, H., Sakai, K., Kusumoto, K.-i., Shigeto, S., Ichikawa, T., Mubarak, H. M., Fukuma, T., Katayama, T., Maruyama, J.-i., Masuo, S., Takaya, N., Takeshita, N.
10.1101/2025.04.06.647446 — Posted: 2025-04-07 — Discussion: 2025-09-09  eLife
Starvation of the bacteria Vibrio atlanticus promotes lightning group-attacks on the dinoflagellate Alexandrium pacificum
Rolland, J. L., Masseret, E., Laabir, M., TETREAU, G., gourbal, b., Thebault, A., Abadie, E., Rodrigues-Stien, A., Veckerle, C., servanne.meunier, e., Destoumieux-Garzon, D., Lagorce, A., lami, r.
10.1101/2024.12.18.629110 — Posted: 2025-01-04 — Discussion: 2025-09-09  eLife
Quantitative RNA pseudouridine landscape reveals dynamic modification patterns and evolutionary conservation across bacterial species
Xu, L., Shen, S., Zhang, Y., Guo, Z., Lu, B., Huang, J., Li, R., Shen, Y., Zhang, L., Deng, X.
10.1101/2025.05.13.653745 — Posted: 2025-05-13 — Discussion: 2025-09-09  eLife
Applying 3D correlative structured illumination microscopy and X-ray tomography to characterise herpes simplex virus-1 morphogenesis
Nahas, K. L., Connor, V., Wijesinghe, K. J., Barrow, H. G., Dobbie, I. M., Harkiolaki, M., Graham, S. C., Crump, C. M.
10.1101/2024.03.13.584906 — Posted: 2024-03-13 — Discussion: 2025-09-09  eLife
Mycobacterial Metallophosphatase MmpE Acts as a Nucleomodulin to Regulate Host Gene Expression and Promote Intracellular Survival
Chen, L., Duan, B., Jiang, Q., Wang, Y., Chen, Y., Zhang, L., Guo, A.
10.1101/2025.06.24.661236 — Posted: 2025-06-24 — Discussion: 2025-09-04  eLife
IFIT1 is rapidly evolving and exhibits disparate antiviral activities across 11 mammalian orders
McDougal, M. B., De Maria, A. M., Boys, I. N., Nakahara, E., Schoggins, J. W.
10.1101/2024.05.13.593954 — Posted: 2024-05-13 — Discussion: 2025-09-03  eLife
The capsule and genetic background, rather than specific loci, strongly influence pneumococcal growth kinetics
Chaguza, C., Arends, D. W., Lo, S. W., Putri, I. H., York, A., Lees, J. A., Wyllie, A. L., Weinberger, D. M., Bentley, S. D., de Jonge, M. I., Cremers, A. J. H.
10.1101/2024.12.05.627025 — Posted: 2024-12-05 — Discussion: 2025-09-01  eLife
Targeted metagenomics using probe capture detects a larger diversity of nitrogen and methane cycling genes in complex microbial communities than traditional metagenomics
Siljanen, H. M. P., Manoharan, L., Hilts, A. S., Bagnoud, A., Alves, R. J. E., Jones, C. M., Sousa, F., Hallin, S., Biasi, C., Schleper, C.
10.1101/2022.11.04.515048 — Posted: 2022-11-04 — Discussion: 2025-09-01  Peer Community In
Gut microbiome remains stable following COVID-19 vaccination in healthy and immuno-compromised individuals
Boston, R. H., Guan, R., Baier, S., Kalmar, L., Horner, E. C., Beristain-Covarrubias, N., Yam-Puc, J. C., Gerber, P. P., Faria, L., Kuroshchenkova, A., Lindell, A. E., Blasche, S., Correa-Noguera, A., Elmer, A., Saunders, C., Bermperi, A., Jose, S., Kingston, N., COVID-19 BioResource Collaboration, , Grigoriadou, S., Staples, E., Buckland, M., Parkinson, C., Lear, S., Matheson, N. J., Benes, V., Thaventhiran, J. E., Patil, K. R.
10.1101/2023.08.23.554506 — Posted: 2023-08-24 — Discussion: 2025-08-30  EMBO Press

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