Channel:  Human Pangenome Reference Consortium (HPRC)

166 Articles

Universal chromatin state annotation of the mouse genome
Vu, H. T., Ernst, J.
10.1101/2022.12.19.521116 — Posted: 2022-12-20
A refined characterization of large-scale genomic differences in the first complete human genome
Yang, X., Wang, X., Zou, Y., Zhang, S., Xia, M., Vollger, M. R., Chen, N.-C., Taylor, D. J., Harvey, W. T., Logsdon, G. A., Meng, D., Shi, J., McCoy, R. C., Schatz, M. C., Li, W., Eichler, E. E., Lu, Q., Mao, Y.
10.1101/2022.12.17.520860 — Posted: 2022-12-19
Comparing Genomic and Epigenomic Features across Species Using the WashU Comparative Epigenome Browser
Zhuo, X., Hsu, S., Purushotham, D., Chen, S., Li, D., Wang, T.
10.1101/2022.11.29.518374 — Posted: 2022-12-02
EUGENe: A Python toolkit for predictive analyses of regulatory sequences
Klie, A., Stites, H., Jores, T., Solvason, J. J., Farley, E. K., Carter, H.
10.1101/2022.10.24.513593 — Posted: 2022-11-09
T1K: efficient and accurate KIR and HLA genotyping with next-generation sequencing data
Song, L., Bai, G., Liu, X. S., Li, B., Li, H.
10.1101/2022.10.26.513955 — Posted: 2022-10-27
Inversion polymorphism in a complete human genome assembly
Porubsky, D., Harvey, W. T., Rozanski, A. N., Ebler, J., Hoeps, W., Ashraf, H., Hasenfeld, P., Paten, B., Sanders, A. D., Marschall, T., Korbel, J. O., Eichler, E. E.
10.1101/2022.10.06.511148 — Posted: 2022-10-06
Unbiased pangenome graphs
Garrison, E., Guarracino, A.
10.1101/2022.02.14.480413 — Posted: 2022-09-15
GBZ File Format for Pangenome Graphs
Siren, J., Paten, B.
10.1101/2022.07.12.499787 — Posted: 2022-09-06
Optimal gap-affine alignment in O(s) space
Marco-Sola, S., Eizenga, J. M., Guarracino, A., Paten, B., Garrison, E., Moreto, M.
10.1101/2022.04.14.488380 — Posted: 2022-08-17
Chromatin state modeling across individuals reveals global patterns of histone modifications
Zou, J., Ernst, J.
10.1101/2022.08.02.502571 — Posted: 2022-08-03

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