Channel: 4D Nucleome

483 Articles

qSR: A software for quantitative analysis of single molecule and super-resolution data

Andrews, J. O., Narayanan, A., Spille, J.-H., Cho, W.-K., Thaler, J. D., Cisse, I. I.

10.1101/146241 — Posted: 2017-06-05

Reconstructing Spatial Transport Distributions In The Nuclear Pore Complex From 2D Images -- How Reliable Is It?

Tu, L.-C., Huisman, M., Chung, Y.-C., Smith, C., Grunwald, D.

10.1101/145110 — Posted: 2017-06-02

Specific Virus-Host Genome Interactions Revealed By Tethered Chromosome Conformation Capture

Li, H., Kalhor, R., Li, B., Su, T., Berk, A., Kurdistani, S., Alber, F., Chen, L.

10.1101/142604 — Posted: 2017-05-26

Static And Dynamic DNA Loops Form AP-1 Bound Activation Hubs During Macrophage Development

Phanstiel, D. H., Van Bortle, K., Spacek, D. V., Hess, G. T., Saad Shamim, M., Machol, I., Love, M. I., Lieberman Aiden, E., Bassik, M. C., Snyder, M. P.

10.1101/142026 — Posted: 2017-05-25

Cohesin Loss Eliminates All Loop Domains, Leading To Links Among Superenhancers And Downregulation Of Nearby Genes

Rao, S., Huang, S.-C., Glenn St. Hilaire, B., Engreitz, J. M., Perez, E. M., Kieffer-Kwon, K.-R., Sanborn, A. L., Johnstone, S. E., Bochkov, I. D., Huang, X., Shamim, M. S., Omer, A. D., Bernstein, B. E., Casellas, R., Lander, E. S., Lieberman Aiden, E.

10.1101/139782 — Posted: 2017-05-18

A Comparison Between Single Cell RNA Sequencing And Single Molecule RNA FISH For Rare Cell Analysis

Torre, E. A., Dueck, H., Shaffer, S., Gospocic, J., Gupte, R., Bonasio, R., Kim, J., Murray, J., Raj, A.

10.1101/138289 — Posted: 2017-05-18

Facilitated Dissociation Of Transcription Factors From Single DNA Binding Sites

Kamar, R. I., Banigan, E. J., Erbas, A., Giuntoli, R. D., Olvera de la Cruz, M., Johnson, R. C., Marko, J. F.

10.1101/135947 — Posted: 2017-05-09

Torque and buckling in stretched intertwined double-helix DNAs

Marko, J., Brahmachari, S.

10.1101/135905 — Posted: 2017-05-09

Ki-67 Contributes To Normal Cell Cycle Progression And Inactive X Heterochromatin In p21 Checkpoint-Proficient Human Cells

Sun, X., Bizhanova, A., Matheson, T. D., Yu, J., Zhu, L. J., Kaufman, P. D.