Channel:  4D Nucleome

474 Articles

Local rewiring of genome - nuclear lamina interactions by transcription.
Brueckner, L., Zhao, P. A., van Schaik, T., Leemans, C., Sima, J., Peric-Hupkes, D., Gilbert, D. M., van Steensel, B.
10.1101/685255 — Posted: 2019-06-27
A chromosome folding intermediate at the condensin-to-cohesin transition during telophase
Abramo, K., Valton, A.-L., Venev, S. V., Ozadam, H., Fox, A. N., Dekker, J.
10.1101/678474 — Posted: 2019-06-21
Multiplex chromatin interaction analysis by signal processing and statistical algorithms
Kim, M., Zheng, M., Tian, S. Z., Capurso, D., Lee, B., Chuang, J. H., Ruan, Y.
10.1101/665232 — Posted: 2019-06-10
HiNT: a computational method for detecting copy number variations and translocations from Hi-C data
Wang, S., Lee, S., Chu, C., Jain, D., Nelson, G., Walsh, J. M., Alver, B. H., Park, P. J.
10.1101/657080 — Posted: 2019-06-03
DNA-segment-capture model for loop extrusion by structural maintenance of chromosome (SMC) protein complexes
Marko, J. F., De Los Rios, P., Barducci, A., Gruber, S.
10.1101/325373 — Posted: 2019-05-23
Jointly embedding multiple single-cell omics measurements
Liu, J., Huang, Y., Singh, R., Vert, J.-P., Noble, W.
10.1101/644310 — Posted: 2019-05-21
Inferring diploid 3D chromatin structures from Hi-C data
Cauer, A., Yardimci, G. G., Vert, J.-P., Varoquaux, N., Noble, W.
10.1101/644294 — Posted: 2019-05-21
Spring Model - chromatin modeling tool based on OpenMM
Kadlof, M., Rozycka, J., Plewczynski, D.
10.1101/642322 — Posted: 2019-05-20
Resolving the 3D landscape of transcription-linked mammalian chromatin folding
Hsieh, T.-H. S., Slobodyanyuk, E., Hansen, A. S., Cattoglio, C., Rando, O. J., Tjian, R., Darzacq, X.
10.1101/638775 — Posted: 2019-05-17
Ultrastructural details of mammalian chromosome architecture
Krietenstein, N., Abraham, S., Venev, S., Abdennur, N., Gibcus, J., Hsieh, T.-H., Parsi, K. M., Yang, L., Maehr, R., Mirny, L., Dekker, J., Rando, O.
10.1101/639922 — Posted: 2019-05-17

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