bioRxiv Channel: NCI Cancer Systems Biology Consortium https://biorxiv.org This feed contains articles for bioRxiv Channel "NCI Cancer Systems Biology Consortium" bioRxiv bioRxiv https://biorxiv.org <![CDATA[ Hybrid approach for parameter estimation in agent-based models ]]> https://biorxiv.org/cgi/content/short/175661v1?rss=1" Gallaher, J. Hawkins-Daarud, A. Massey, S. C. Swanson, K. Anderson, A. 2017-08-13 doi:10.1101/175661 Cold Spring Harbor Laboratory Press 2017-08-13 <![CDATA[ The dynamic tumor ecosystem: how cell turnover and trade-offs affect cancer evolution ]]> https://biorxiv.org/cgi/content/short/270900v1?rss=1" Gallaher, J. Brown, J. Anderson, A. R. A. 2018-02-26 doi:10.1101/270900 Cold Spring Harbor Laboratory Press 2018-02-26 <![CDATA[ Adaptive Therapy For Heterogeneous Cancer: Exploiting Space And Trade-Offs In Drug Scheduling ]]> https://biorxiv.org/cgi/content/short/128959v1?rss=1" Gallaher, J. A. Enriquez-Navas, P. M. Luddy, K. A. Gatenby, R. A. Anderson, A. R. A. 2017-04-20 doi:10.1101/128959 Cold Spring Harbor Laboratory Press 2017-04-20 <![CDATA[ EvoFreq: Visualization of the Evolutionary Frequencies of Sequence and Model Data ]]> https://biorxiv.org/cgi/content/short/743815v1?rss=1" Gatenbee, C. D. Schenck, R. O. Bravo, R. R. Anderson, A. R. A. 2019-08-22 doi:10.1101/743815 Cold Spring Harbor Laboratory Press 2019-08-22 <![CDATA[ Antifragile therapy ]]> https://biorxiv.org/cgi/content/short/2020.10.08.331678v1?rss=1" West, J. Strobl, M. Armagost, C. Miles, R. Marusyk, A. Anderson, A. R. A. 2020-10-09 doi:10.1101/2020.10.08.331678 Cold Spring Harbor Laboratory Press 2020-10-09 <![CDATA[ DDN2.0: R and Python packages for differential dependency network analysis of biological systems ]]> https://biorxiv.org/cgi/content/short/2021.04.10.439301v1?rss=1" Zhang, B. Fu, Y. Lu, Y. Zhang, Z. Clarke, R. Van Eyk, J. E. Herrington, D. M. Wang, Y. 2021-04-11 doi:10.1101/2021.04.10.439301 Cold Spring Harbor Laboratory Press 2021-04-11 <![CDATA[ A community-based approach to image analysis of cells, tissues and tumors ]]> https://biorxiv.org/cgi/content/short/2021.07.22.451363v1?rss=1" CSBC/PS-ON Image Analysis Working Group, Vizcarra, J. C. Burlingame, E. A. Hug, C. B. Goltsev, Y. White, B. S. Tyson, D. R. Sokolov, A. 2021-07-25 doi:10.1101/2021.07.22.451363 Cold Spring Harbor Laboratory Press 2021-07-25 <![CDATA[ Reconstruction of Contemporary Human Stem Cell Dynamics with Oscillatory Molecular Clocks ]]> https://biorxiv.org/cgi/content/short/2021.03.15.435426v1?rss=1" Gabbutt, C. Schenck, R. O. Weisenberger, D. Kimberley, C. Berner, A. Househam, J. Lakatos, E. Robertson-Tessi, M. Martin, I. Patel, R. Clark, S. Latchford, A. Barnes, C. P. Leedham, S. J. Anderson, A. R. Graham, T. A. Shibata, D. 2021-03-16 doi:10.1101/2021.03.15.435426 Cold Spring Harbor Laboratory Press 2021-03-16 <![CDATA[ Cancer Hallmarks Define a Continuum of Plastic Cell States between Small Cell Lung Cancer Archetypes ]]> https://biorxiv.org/cgi/content/short/2021.01.22.427865v1?rss=1" Groves, S. M. Ireland, A. Liu, Q. Simmons, A. J. Lau, K. Iams, W. T. Tyson, D. R. Lovly, C. Oliver, T. G. Quaranta, V. 2021-01-24 doi:10.1101/2021.01.22.427865 Cold Spring Harbor Laboratory Press 2021-01-24 <![CDATA[ A unified atlas of CD8 T cell dysfunctional states in cancer and infection ]]> https://biorxiv.org/cgi/content/short/2020.07.25.220673v1?rss=1" Pritykin, Y. van der Veeken, J. Pine, A. Zhong, Y. Sahin, M. Mazutis, L. Pe'er, D. Rudensky, A. Leslie, C. S. 2020-07-26 doi:10.1101/2020.07.25.220673 Cold Spring Harbor Laboratory Press 2020-07-26