bioRxiv Subject Collection: Genetics Plant Biology
https://biorxiv.org
This feed contains articles for bioRxiv Subject Collection "Genetics Plant Biology"
bioRxivbioRxivhttps://www.biorxiv.org/sites/default/files/bioRxiv_article.jpg
https://www.biorxiv.org
<![CDATA[
A novel mouse model of rare neurodevelopmental disorder, TBCK Syndrome
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723566v1?rss=1
2026-05-11doi:10.64898/2026.05.07.723566Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
Frequency-domain identification of photosynthetic regulation under fluctuating light
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.722921v1?rss=1
2026-05-11doi:10.64898/2026.05.06.722921Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
Cp36 serine recombinase as a new tool for zebrafish transgenesis
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.723361v1?rss=1
2026-05-11doi:10.64898/2026.05.06.723361Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
Allele-resolved monosome and polysome sequencing identifies functional cis-acting variants affecting mRNA translation efficiency
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723424v1?rss=1
2026-05-11doi:10.64898/2026.05.07.723424Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
AI platform for CRISPR functional mapping and function-based drug design
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.722817v1?rss=1
2026-05-11doi:10.64898/2026.05.06.722817Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
decepentaplegic directs the wiring of female-differentiated fruitless sex peptide response-inducing neurons
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.723318v1?rss=1
2026-05-11doi:10.64898/2026.05.06.723318Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
A multi-species toolkit of TOP2 hypercleavage mutants for studying topoisomerase II-mediated DNA damage
]]>
https://www.biorxiv.org/content/10.64898/2026.05.09.723998v1?rss=1
2026-05-11doi:10.64898/2026.05.09.723998Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
Haplotype-based models improve sweep detection in ancient populations with complex demography
]]>
https://www.biorxiv.org/content/10.64898/2026.05.08.723766v1?rss=1
2026-05-11doi:10.64898/2026.05.08.723766Cold Spring Harbor Laboratory2026-05-11
<![CDATA[
The nonsense-mediated decay RNA-surveillance pathway facilitates the hypoxia response by C. elegans
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.721854v1?rss=1
2026-05-10doi:10.64898/2026.05.06.721854Cold Spring Harbor Laboratory2026-05-10
<![CDATA[
The variable wheat stripe rust effector AvrYr7 evades Yr7 recognition through sequence and expression polymorphisms
]]>
https://www.biorxiv.org/content/10.64898/2026.05.09.724051v1?rss=1
2026-05-10doi:10.64898/2026.05.09.724051Cold Spring Harbor Laboratory2026-05-10
<![CDATA[
Evolutionary diversification of the SymRK receptor family in land plants
]]>
https://www.biorxiv.org/content/10.64898/2026.05.08.723708v1?rss=1
2026-05-10doi:10.64898/2026.05.08.723708Cold Spring Harbor Laboratory2026-05-10
<![CDATA[
LIME: a fully automated pipeline for high-throughput quantification of leaf lesions
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723432v1?rss=1
2026-05-10doi:10.64898/2026.05.07.723432Cold Spring Harbor Laboratory2026-05-10
<![CDATA[
A massively parallel reporter assay of MECP2 cis-regulatory elements reveals genetic candidates for male-biased autism
]]>
https://www.biorxiv.org/content/10.64898/2026.05.08.723809v1?rss=1
2026-05-09doi:10.64898/2026.05.08.723809Cold Spring Harbor Laboratory2026-05-09
<![CDATA[
IRES-TrAPPr reveals novel insights into viral and cellular mRNA translation
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.723280v1?rss=1
2026-05-09doi:10.64898/2026.05.06.723280Cold Spring Harbor Laboratory2026-05-09
<![CDATA[
Dim Green Light Enables Day-and-Night Monitoring of Leaf Movements
]]>
https://www.biorxiv.org/content/10.64898/2026.05.08.723725v1?rss=1
2026-05-09doi:10.64898/2026.05.08.723725Cold Spring Harbor Laboratory2026-05-09
<![CDATA[
Turnip mosaic virus co-opts host RNA methylation to orchestrate plant infection
]]>
https://www.biorxiv.org/content/10.64898/2026.05.08.723783v1?rss=1
2026-05-09doi:10.64898/2026.05.08.723783Cold Spring Harbor Laboratory2026-05-09
<![CDATA[
The common symbiosis pathway controls plant root microbiomes in a host-specific manner
]]>
https://www.biorxiv.org/content/10.64898/2026.05.08.723321v1?rss=1
2026-05-09doi:10.64898/2026.05.08.723321Cold Spring Harbor Laboratory2026-05-09
<![CDATA[
The Case for Kinases:A Phosphorylation Driven Model for Circadian Temperature Compensation
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723636v1?rss=1
2026-05-09doi:10.64898/2026.05.07.723636Cold Spring Harbor Laboratory2026-05-09
<![CDATA[
Reaction Norm Modeling of High-Dimensional Genomic and Environmental Data Improves Prediction Accuracy in Winter Wheat
]]>
https://www.biorxiv.org/content/10.64898/2026.05.05.722758v1?rss=1
2026-05-08doi:10.64898/2026.05.05.722758Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
Genomic and Transcriptomic Basis of Salinity Tolerance in Dry Pea
]]>
https://www.biorxiv.org/content/10.64898/2026.05.05.722931v1?rss=1
2026-05-08doi:10.64898/2026.05.05.722931Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
The lack of peroxisomal Glycolate Oxidases 1 and 2 influences mitochondrial electron transport chain and its redox state under control and cadmium stress
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.723131v1?rss=1
2026-05-08doi:10.64898/2026.05.06.723131Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
Zea Lip: An atlas of glycerolipid profiles across leaf development in maize
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723536v1?rss=1
2026-05-08doi:10.64898/2026.05.07.723536Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
PAT: An Image Analysis Tool for Automated Scoring of Pollen in Alexander-Stained Anthers
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723495v1?rss=1
2026-05-08doi:10.64898/2026.05.07.723495Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
Cryptic variation alters gene dosage sensitivity to shape inflorescence architecture in tomato
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.722400v1?rss=1
2026-05-08doi:10.64898/2026.05.07.722400Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
Sequence adaptations in the intracellular domain of Symbiosis receptor-like kinase (SymRK) promoted infection thread progression in root nodule primordia
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723153v1?rss=1
2026-05-08doi:10.64898/2026.05.07.723153Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
CSLB4-mediated cell wall remodeling decouples phloem access from aphid performance in Arabidopsis thaliana
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.723330v1?rss=1
2026-05-08doi:10.64898/2026.05.06.723330Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
A natural soil-derived microbiota reshapes nitrogen form and plant mineral nutrition
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723502v1?rss=1
2026-05-08doi:10.64898/2026.05.07.723502Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
Herbivory-induced alterations in cytosolic proteins of pigeon pea (Cajanus cajan) leaves
]]>
https://www.biorxiv.org/content/10.64898/2026.05.07.723431v1?rss=1
2026-05-08doi:10.64898/2026.05.07.723431Cold Spring Harbor Laboratory2026-05-08
<![CDATA[
A high-resolution atlas of cattle regulatory variants and their cross-species activity in matched human cells
]]>
https://www.biorxiv.org/content/10.64898/2026.05.06.723179v1?rss=1
1.5 billion DNA fragments spanning both cattle subspecies. In primary bovine cells, we assay >15 million variants and identify >150,000 expression-modulating variants enriched at cattle eQTL and GWAS loci. This enables the refinement of broad association signals to small sets of candidate functional regulatory variants. Our haplotype-aware framework captures rare, multi-allelic and tightly linked variants poorly resolved by conventional eQTL studies, and quantifies the disproportionate impact of larger variants on transcription. Furthermore, we use these data to train a deep-learning model that successfully predicts bovine promoter activity directly from sequence. Profiling the same cattle DNA in matched primary human cells reveals widespread conservation of promoter and enhancer activity, allelic effects and regulatory grammar, supporting the transfer of annotations and models across species. However, species-dependent effects are enriched in evolutionarily young sequences and p53-family motifs, highlighting the limits to simple cross-species extrapolation. Together, these data provide a high-resolution atlas of cattle regulatory variation and a framework for prioritising causal noncoding variants for cattle trait improvement.
]]>2026-05-07doi:10.64898/2026.05.06.723179Cold Spring Harbor Laboratory2026-05-07
<![CDATA[
Genome-wide CRISPR knockout cell screening platform for the disease vector tick species Ixodes scapularis
]]>
https://www.biorxiv.org/content/10.64898/2026.05.05.721418v1?rss=1
2026-05-07doi:10.64898/2026.05.05.721418Cold Spring Harbor Laboratory2026-05-07